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Revert "Remove GitHub Actions since all seem to be borked"
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This reverts commit 3955546.
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adamhsparks committed May 7, 2020
1 parent f64cbb3 commit 6496c91
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1 change: 1 addition & 0 deletions .github/.gitignore
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*.html
92 changes: 92 additions & 0 deletions .github/workflows/R-CMD-check.yaml
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on:
push:
branches:
- master
pull_request:
branches:
- master

name: R-CMD-check

jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}

name: ${{ matrix.config.os }} (${{ matrix.config.r }})

strategy:
fail-fast: false
matrix:
config:
- {os: macOS-latest, r: 'devel'}
- {os: macOS-latest, r: '4.0'}
- {os: windows-latest, r: '4.0'}
- {os: ubuntu-18.04, r: '4.0', rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
- {os: ubuntu-18.04, r: '3.6', rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}

env:
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
RSPM: ${{ matrix.config.rspm }}

steps:
- uses: actions/checkout@v2

- uses: r-lib/actions/setup-r@master
with:
r-version: ${{ matrix.config.r }}

- uses: r-lib/actions/setup-pandoc@master

- name: Query dependencies
run: |
install.packages('remotes')
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
shell: Rscript {0}

- name: Cache R packages
if: runner.os != 'Windows'
uses: actions/cache@v1
with:
path: ${{ env.R_LIBS_USER }}
key: ${{ runner.os }}-r-${{ matrix.config.r }}-1-${{ hashFiles('.github/depends.Rds') }}
restore-keys: ${{ runner.os }}-r-${{ matrix.config.r }}-1-

- name: Install system dependencies
if: runner.os == 'Linux'
env:
RHUB_PLATFORM: linux-x86_64-ubuntu-gcc
run: |
Rscript -e "remotes::install_github('r-hub/sysreqs')"
sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))")
sudo -s eval "$sysreqs"
- name: Install dependencies
run: |
remotes::install_deps(dependencies = TRUE)
remotes::install_cran("rcmdcheck")
shell: Rscript {0}

- name: Session info
run: |
options(width = 100)
pkgs <- installed.packages()[, "Package"]
sessioninfo::session_info(pkgs, include_base = TRUE)
shell: Rscript {0}

- name: Check
env:
_R_CHECK_CRAN_INCOMING_: false
run: rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), error_on = "warning", check_dir = "check")
shell: Rscript {0}

- name: Show testthat output
if: always()
run: find check -name 'testthat.Rout*' -exec cat '{}' \; || true
shell: bash

- name: Upload check results
if: failure()
uses: actions/upload-artifact@master
with:
name: ${{ runner.os }}-r${{ matrix.config.r }}-results
path: check
45 changes: 45 additions & 0 deletions .github/workflows/pkgdown.yaml
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on:
push:
branches: master

name: pkgdown

jobs:
pkgdown:
runs-on: macOS-latest
steps:
- uses: actions/checkout@v2

- uses: r-lib/actions/setup-r@master

- uses: r-lib/actions/setup-pandoc@master

- name: Query dependencies
run: |
install.packages("remotes")
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
shell: Rscript {0}

- name: XQuartz
run: |
brew cask install xquartz
- name: Cache R packages
uses: actions/cache@v1
with:
path: ${{ env.R_LIBS_USER }}
key: macOS-r-4.0-1-${{ hashFiles('.github/depends.Rds') }}
restore-keys: macOS-r-4.0-1-
- name: Install dependencies
run: |
install.packages("ggplot2")
remotes::install_deps(dependencies = TRUE, type = "binary")
remotes::install_dev("pkgdown")
shell: Rscript {0}

- name: Install package
run: R CMD INSTALL .

- name: Deploy package
run: pkgdown::deploy_to_branch(new_process = FALSE)
shell: Rscript {0}
13 changes: 13 additions & 0 deletions .github/workflows/publish_docker.yaml
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name: Publish Docker
on: [push]
jobs:
build:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@master
- name: Publish to Registry
uses: elgohr/Publish-Docker-Github-Action@master
with:
name: adamhsparks/chickpea_asco_dispersal
username: ${{ secrets.DOCKER_USERNAME }}
password: ${{ secrets.DOCKER_PASSWORD }}

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