reboot all figs with lcomps ghosted

afsc-assessments · Oct 23, 2024 · 17e9a70 · 17e9a70
1 parent 2245552
commit 17e9a70
Show file tree

Hide file tree

Showing 7 changed files with 260 additions and 3 deletions.
diff --git a/.RDataTmp2 b/.RDataTmp2
diff --git a/.RDataTmp3 b/.RDataTmp3
diff --git a/2024/R/2024_analysis.R b/2024/R/2024_analysis.R
@@ -261,7 +261,7 @@ mod18.2c_2020$timeseries %>%
 
 ggsave(last_plot(), file = here::here(mod_path,'plots','compare',
                                       'compare18_totalbiomass.png'),
-       width = 5, height = 4, dpi = 520, units = 'in')
+       width = 5, height = 3, dpi = 520, units = 'in')
 
 
 # misc figures ----

diff --git a/2024/figs/catch_over_totbio_timeseries.png b/2024/figs/catch_over_totbio_timeseries.png
diff --git a/2024/figs/catch_vs_spawnbio.png b/2024/figs/catch_vs_spawnbio.png
diff --git a/2024/mgmt/18.2c_2024-nhauls/2024_BSAI_FHS.dat b/2024/mgmt/18.2c_2024-nhauls/2024_BSAI_FHS.dat
@@ -252,8 +252,8 @@
 2017	7	-1	3	0	2037	0.000294259	0	0	0	5.37E-05	6.44E-05	6.95E-05	9.90E-05	0.000213863	0.000667252	0.001489788	0.0053076	0.011138051	0.020538089	0.037563064	0.050785564	0.05875796	0.113459399	0.11277379	0.063039014	0.022878484	0.003776565	0.000165292	3.52E-05	0	0	1.33E-05	0	6.48E-05	0.000277348	0.000263677	0.000938408	0.0023616	0.005081205	0.012546653	0.018688111	0.043324025	0.052812781	0.084078732	0.116918556	0.092095054	0.050339393	0.012302921	0.002948355	0.001745982	2.51E-05	0	4.19E-06
 2018	7	-1	3	0	2407	0	0	0	0	0	5.97E-05	0.000118155	0.000344804	0.000987412	0.002270454	0.003159055	0.008336143	0.017898544	0.019438428	0.029953153	0.039845511	0.044274964	0.098161481	0.119933221	0.091709321	0.037482099	0.005675033	0.000620796	0.000270102	0	0	1.80E-05	2.98E-05	0.000204678	0.000109408	0.000554614	0.001163872	0.002396086	0.005516235	0.011314657	0.025122753	0.042447794	0.058864227	0.072632824	0.080116238	0.089201456	0.06869882	0.01429726	0.004693968	0.001332192	0.000390287	0	0.000356485
 2019	7	-1	3	0	3547	3.63E-05	7.27E-05	0	0	3.56E-05	5.96E-05	0.000497108	0.000790517	0.001572312	0.002307842	0.004227342	0.007242709	0.012989987	0.019361669	0.029324873	0.040492845	0.050959633	0.088517275	0.105065672	0.087268293	0.037471818	0.006224455	0.000672749	0.000452702	0	0	5.11E-05	0.000141919	1.32E-05	0.000458473	0.000584057	0.002147776	0.005145518	0.008925303	0.012634295	0.01918336	0.031900777	0.051341024	0.073954632	0.091347377	0.096837115	0.08391658	0.01930482	0.00449034	0.00166611	0.000198671	0	0.000113471
-2020	7	1	3	0	2216	0	0	0	0.000111161	0.00018656	1.46E-05	0.000722068	0.002357382	0.005062241	0.008972704	0.021725123	0.033266502	0.045815038	0.048601636	0.065758896	0.059506481	0.053581836	0.071502362	0.063991818	0.050469403	0.019975048	0.005075689	0.000658249	0.000570371	0.000109708	0	0	3.94E-05	0.000115534	0.000701093	0.00124543	0.003834064	0.007558026	0.014715077	0.027847434	0.04233406	0.059835349	0.066070572	0.053963729	0.053326887	0.047956181	0.047031354	0.012531199	0.001863747	0.000656925	0.000222114	3.90E-05	7.80E-05
-2021	7	1	3	0	2458	0	0	0	3.03E-05	0	0.000131247	0.000981093	0.003261282	0.002959671	0.010215798	0.016652926	0.025893619	0.048931855	0.056404237	0.05676556	0.052065109	0.041645189	0.058311453	0.057083067	0.060500895	0.035983047	0.009501911	0.000846744	0.000325248	0	0	0	0	0.000169411	0.000195316	0.001481972	0.002648177	0.006183822	0.011751456	0.025660294	0.049343543	0.064552814	0.071064735	0.052921368	0.049455382	0.050498117	0.051345952	0.014715057	0.004930575	0.003914085	0.00067763	0	0
+2020	7	-1	3	0	2216	0	0	0	0.000111161	0.00018656	1.46E-05	0.000722068	0.002357382	0.005062241	0.008972704	0.021725123	0.033266502	0.045815038	0.048601636	0.065758896	0.059506481	0.053581836	0.071502362	0.063991818	0.050469403	0.019975048	0.005075689	0.000658249	0.000570371	0.000109708	0	0	3.94E-05	0.000115534	0.000701093	0.00124543	0.003834064	0.007558026	0.014715077	0.027847434	0.04233406	0.059835349	0.066070572	0.053963729	0.053326887	0.047956181	0.047031354	0.012531199	0.001863747	0.000656925	0.000222114	3.90E-05	7.80E-05
+2021	7	-1	3	0	2458	0	0	0	3.03E-05	0	0.000131247	0.000981093	0.003261282	0.002959671	0.010215798	0.016652926	0.025893619	0.048931855	0.056404237	0.05676556	0.052065109	0.041645189	0.058311453	0.057083067	0.060500895	0.035983047	0.009501911	0.000846744	0.000325248	0	0	0	0	0.000169411	0.000195316	0.001481972	0.002648177	0.006183822	0.011751456	0.025660294	0.049343543	0.064552814	0.071064735	0.052921368	0.049455382	0.050498117	0.051345952	0.014715057	0.004930575	0.003914085	0.00067763	0	0
 2022	7	1	3	0	2254	0	0	0	0	0.000122041	0.000183096	0.000616234	0.001186424	0.003265528	0.007836999	0.013688383	0.026443201	0.040911341	0.05009823	0.050228988	0.056898646	0.041973796	0.049613406	0.050051547	0.049797696	0.032220319	0.005010144	0.000208864	8.65E-05	0	0	2.15E-05	0	9.53E-05	5.15E-05	0.000617408	0.002000862	0.005648342	0.008882352	0.027933752	0.049362966	0.072944127	0.098159636	0.076936037	0.060388089	0.047895769	0.052581738	0.012207355	0.002178447	0.001292316	0.000223613	8.85E-05	4.90E-05
 2023	7	1	3	0	1260	0	0	0	0	0	4.79E-05	0.000205211	0.001826576	0.004234342	0.009172067	0.018965045	0.02531089	0.031961276	0.039582768	0.048514866	0.04884404	0.04385147	0.048112247	0.047364923	0.054253769	0.02645658	0.005562744	0.000157269	6.17E-05	0	0	0	0	0	0.00040159	0.001086312	0.002357798	0.00404465	0.014569327	0.024731504	0.043873313	0.077236232	0.092351061	0.080968542	0.055139459	0.05632107	0.065623512	0.021915456	0.003480257	0.000998177	0.000410673	0	5.34E-06
 -9999	0	 0	0	0	   0	0.00000e+00	0.00000e+00	0.00000e+00	0.00000e+00	0.00000e+00	0.00000e+00	0.00000e+00	0.00000e+00	0.000000000	0.000000000	0.000000000	0.00000000	0.00000000	0.0000000	0.0000000	0.0000000	0.00000000	0.00000000	0.00000000	0.000000000	0.00000e+00	0.00000e+00	0.00000e+00	0.00000e+00	0.00000e+00	0.00000e+00	0.00000e+00	0.00000e+00	0.00000e+00	0.00000e+00	0.00000e+00	0.000000000	0.000000000	0.00000000	0.00000000	0.0000000	0.0000000	0.0000000	0.00000000	0.00000000	0.000000000	0.00000e+00	0.00000e+00	0.00000e+00	0.00000e+00	0.00000e+00	0.00000e+00	0.00000e+00	#_terminator