diff --git a/vignettes/getting_started.Rmd b/vignettes/getting_started.Rmd index 6a2582e..8da167e 100644 --- a/vignettes/getting_started.Rmd +++ b/vignettes/getting_started.Rmd @@ -224,7 +224,7 @@ The function `refit_Growth()` can be used to generate plots of the growth parame -Then, run the function with the breakpoints as-is and inspect the outputs. +Run the function with the breakpoints as-is and inspect the outputs. ```{r, echo = TRUE, include = TRUE, warning = FALSE} # fits1 <- refit_Growth(simulated_data, breakpoints, showPlot = FALSE) @@ -247,7 +247,7 @@ fits1$fits_plot # Updating and re-fitting the breakpoints -Based on the exploration above, you may decide to manually combine the second and third strata, using just a single breakpoint north to south. In this case, we would do away with the breakpoint at $-141^{\circ}$)W, replacing it with `-Inf`: +Based on the exploration above, you may decide to manually combine the second and third strata, using just a single breakpoint north to south. In this case, we would do away with the breakpoint at $-141^{\circ}$)W, replacing it with `-Inf`. ```{r, echo = TRUE, include = TRUE, warning = FALSE} @@ -257,7 +257,7 @@ breakpoints$long <- -Inf # showPlot = FALSE) ## refit the curves ``` -We can repeat the visualization and see that 1) the parameter values are now more distinct from one another and 2) so are the curves. +We can repeat the visualization and see that 1) the key parameter values are now more distinct from one another and 2) so are the curves. ```{r, echo = TRUE, include = TRUE, warning = FALSE} fits2$pars_plot