Fix genomic profile filtering

alisman · Oct 29, 2024 · 8ac5d44 · 8ac5d44
1 parent bfc6179
commit 8ac5d44
Showing 1 changed file with 4 additions and 4 deletions.
diff --git a/src/main/resources/org/cbioportal/persistence/mybatisclickhouse/StudyViewFilterMapper.xml b/src/main/resources/org/cbioportal/persistence/mybatisclickhouse/StudyViewFilterMapper.xml
@@ -38,7 +38,7 @@
                 SELECT * FROM (
                 <foreach item="ANDGroup" collection="studyViewFilterHelper.studyViewFilter.genomicProfiles" separator="INTERSECT">
                     SELECT sample_derived.sample_unique_id
-                    FROM sample_profile
+                    FROM sample_profile GYMP
                     JOIN genetic_profile gp ON sample_profile.genetic_profile_id = gp.genetic_profile_id
                     JOIN cancer_study cs ON gp.cancer_study_id = cs.cancer_study_id
                     JOIN sample_derived on sample_profile.sample_id = sample_derived.internal_id
@@ -48,9 +48,9 @@
                             #{studyId}
                         </foreach>
                         AND
-                        <foreach item="studyId" collection="studyViewFilterHelper.studyViewFilter.studyIds" open="(" separator=" OR " close=")">
-                            <foreach item="genomicProfileId" collection="ANDGroup" open="(" separator="OR" close=")">
-                                gp.stable_id='#{studyId}_#{genomicProfileId}'
+                        <foreach item="studyId" collection="studyViewFilterHelper.studyViewFilter.studyIds" open="(" close=")" separator="OR">
+                            <foreach item="genomicProfileId" collection="ANDGroup" open="(" separator=" OR " close=")">
+                                gp.stable_id=concat(#{studyId}, '_', #{genomicProfileId})
                             </foreach>
                         </foreach>
                     </where>