Autoupdated webUI deps #294
Workflow file for this run
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name: Main branch Build and Deployment | |
on: | |
pull_request: | |
types: [closed] | |
branches: | |
- main | |
jobs: | |
cancel-incomplete-validations: | |
name: Cancel all incomplete PR-validations for closed PR (further validation on closed PRs are irrelevant) | |
permissions: | |
actions: write | |
runs-on: ubuntu-22.04 | |
concurrency: | |
group: PR validation-${{ github.event.pull_request.number }} | |
cancel-in-progress: true | |
steps: | |
# Execution of this job (step) will cancel all incomplete PR-validation runs on the closed PR through GHA concurrency. | |
- name: Cancelling all PR validation runs for PR ${{ github.event.pull_request.number }} | |
run: | | |
echo "Done." | |
on-merge: | |
name: Skip on unmerged | |
if: github.event.pull_request.merged == true | |
runs-on: ubuntu-22.04 | |
steps: | |
- name: Confirm execution | |
shell: bash | |
run: | | |
echo "PR merge detected and deployment wanted." | |
on-deploy: | |
name: Skip on 'no-deploy' PRs | |
needs: on-merge | |
if: '!contains(github.event.pull_request.labels.*.name, ''no-deploy'')' | |
runs-on: ubuntu-22.04 | |
steps: | |
- name: Confirm execution | |
shell: bash | |
run: | | |
echo "PR merge detected and deployment wanted." | |
commit-deps-lock-updates: | |
name: Commit dependency lock updates as proposed during PR validation | |
concurrency: | |
group: ${{ github.workflow }}-commit-deps-lock-updates | |
cancel-in-progress: true | |
runs-on: ubuntu-22.04 | |
needs: | |
- on-merge | |
permissions: | |
contents: write | |
outputs: | |
latest-commit-sha: ${{ steps.store-output.outputs.latest-commit-sha }} | |
git-describe: ${{ steps.store-output.outputs.git-describe }} | |
env: | |
latest_commit_sha: | |
steps: | |
- name: create token for committing and pushing as agr-github-actions app | |
uses: actions/create-github-app-token@v1 | |
id: app-token | |
with: | |
app-id: ${{ secrets.GH_ACTIONS_APP_ID }} | |
private-key: ${{ secrets.GH_ACTIONS_APP_PRIVATE_KEY }} | |
- name: Get GitHub App User ID | |
id: app-user-id | |
run: echo "user-id=$(gh api "/users/${{ steps.app-token.outputs.app-slug }}[bot]" --jq .id)" >> "$GITHUB_OUTPUT" | |
env: | |
GH_TOKEN: ${{ steps.app-token.outputs.token }} | |
- uses: actions/checkout@v4 | |
with: | |
fetch-depth: 0 | |
token: ${{ steps.app-token.outputs.token }} | |
persist-credentials: true | |
- name: Store checkout sha in env variable | |
run: | | |
echo "latest_commit_sha=$(git log -1 --format=%H)" >> "$GITHUB_ENV" | |
- name: Download updated dependencies lock files bundle | |
if: ${{ !contains(github.event.pull_request.labels.*.name, 'no-deps-lock-updates') }} | |
uses: dawidd6/action-download-artifact@v6 | |
with: | |
name: deps_lock_files_bundle | |
pr: ${{ github.event.pull_request.number }} | |
workflow: PR-validation.yml | |
workflow_conclusion: success | |
workflow_search: false | |
allow_forks: false | |
if_no_artifact_found: fail | |
- name: Unpack the bundle | |
if: ${{ !contains(github.event.pull_request.labels.*.name, 'no-deps-lock-updates') }} | |
run: | | |
tar -xzv -f deps-lock-files.tar.gz | |
- name: commit dependency lock file changes | |
id: deps-lock-commit | |
if: ${{ !contains(github.event.pull_request.labels.*.name, 'no-deps-lock-updates') }} | |
uses: stefanzweifel/git-auto-commit-action@v5 | |
with: | |
branch: ${{ github.base_ref }} | |
commit_user_name: ${{ steps.app-token.outputs.app-slug }}[bot] | |
commit_user_email: ${{ steps.app-user-id.outputs.user-id }}+${{ steps.app-token.outputs.app-slug }}[bot]@users.noreply.github.com | |
commit_author: ${{ steps.app-token.outputs.app-slug }}[bot] <${{ steps.app-user-id.outputs.user-id }}+${{ steps.app-token.outputs.app-slug }}[bot]@users.noreply.github.com> | |
commit_message: Auto-updated deps lock files [skip actions] | |
file_pattern: '*requirements.txt *package-lock.json' | |
disable_globbing: true | |
skip_checkout: true | |
skip_fetch: true | |
- name: Store commit sha in env variable (if updated) | |
if: steps.deps-lock-commit.outputs.commit_hash | |
run: | | |
echo "latest_commit_sha=${{ steps.deps-lock-commit.outputs.commit_hash }}" >> "$GITHUB_ENV" | |
- name: store latest_commit_sha job output | |
id: store-output | |
run: | | |
echo "latest-commit-sha=${{ env.latest_commit_sha }}" >> "$GITHUB_OUTPUT" | |
echo "git-describe=$(git describe --tags)" >> $GITHUB_OUTPUT | |
build-pavi-shared-aws-module: | |
name: Build pavi_shared_aws package | |
runs-on: ubuntu-22.04 | |
concurrency: | |
group: ${{ github.workflow }}-build-pavi-shared-aws-module | |
cancel-in-progress: true | |
needs: [commit-deps-lock-updates, on-deploy] | |
steps: | |
- name: Check out repository code | |
uses: actions/checkout@v4 | |
with: | |
ref: ${{ needs.commit-deps-lock-updates.outputs.latest-commit-sha }} | |
fetch-depth: 0 | |
sparse-checkout: | | |
Makefile | |
shared_aws/py_package/ | |
- name: Setup Python | |
uses: actions/setup-python@v5 | |
with: | |
python-version: "3.12" | |
- name: Build the pavi_shared_aws package | |
working-directory: ./shared_aws/py_package | |
run: | | |
make clean build | |
- name: Upload package as artifact | |
uses: actions/upload-artifact@v4 | |
with: | |
name: shared_aws_py_package | |
path: shared_aws/py_package/dist/pavi_shared_aws-0.0.0-py3-none-any.whl | |
deploy-shared-aws-infra: | |
name: Deploy/update shared PAVI AWS infrastructure | |
concurrency: | |
group: ${{ github.workflow }}-deploy-shared-aws-infra | |
cancel-in-progress: false | |
needs: | |
- commit-deps-lock-updates | |
- on-deploy | |
- build-pavi-shared-aws-module | |
permissions: | |
id-token: write # This is required for requesting the JWT for gaining permissions to assume the IAM role to perform AWS actions | |
runs-on: ubuntu-22.04 | |
defaults: | |
run: | |
working-directory: shared_aws/aws_infra | |
steps: | |
- name: Check out repository code | |
uses: actions/checkout@v4 | |
with: | |
ref: ${{ needs.commit-deps-lock-updates.outputs.latest-commit-sha }} | |
- name: Setup node.js (CDK CLI requirement) | |
uses: actions/setup-node@v4 | |
with: | |
node-version: "20" | |
- name: Setup Python | |
uses: actions/setup-python@v5 | |
with: | |
python-version: "3.12" | |
- name: Download shared AWS package | |
uses: actions/download-artifact@v4 | |
with: | |
name: shared_aws_py_package | |
path: /tmp/ | |
- name: AWS credentials configuration | |
uses: aws-actions/configure-aws-credentials@v4 | |
with: | |
role-to-assume: ${{secrets.GH_ACTIONS_AWS_ROLE}} | |
role-session-name: gh-actions-${{github.run_id}}.${{github.run_number}}.${{github.run_attempt}}-cdk-deploy | |
aws-region: us-east-1 | |
- name: CDK validations (resource assertions and cdk diff) | |
run: make validate-stack | |
- name: Deploy CDK Stack | |
run: make deploy-stack ADD_CDK_ARGS="--require-approval never" | |
pipeline-deploy-aws-infra: | |
name: Deploy/update AWS infrastructure for pipeline | |
concurrency: | |
group: ${{ github.workflow }}-pipeline-deploy-aws-infra | |
cancel-in-progress: false | |
needs: | |
- commit-deps-lock-updates | |
- on-deploy | |
- build-pavi-shared-aws-module | |
- deploy-shared-aws-infra | |
permissions: | |
id-token: write # This is required for requesting the JWT for gaining permissions to assume the IAM role to perform AWS actions | |
runs-on: ubuntu-22.04 | |
defaults: | |
run: | |
working-directory: pipeline/aws_infra | |
steps: | |
- name: Check out repository code | |
uses: actions/checkout@v4 | |
with: | |
ref: ${{ needs.commit-deps-lock-updates.outputs.latest-commit-sha }} | |
- name: Setup node.js (CDK CLI requirement) | |
uses: actions/setup-node@v4 | |
with: | |
node-version: "20" | |
- name: Setup Python | |
uses: actions/setup-python@v5 | |
with: | |
python-version: "3.12" | |
- name: Download shared AWS package | |
uses: actions/download-artifact@v4 | |
with: | |
name: shared_aws_py_package | |
path: /tmp/ | |
- name: AWS credentials configuration | |
uses: aws-actions/configure-aws-credentials@v4 | |
with: | |
role-to-assume: ${{secrets.GH_ACTIONS_AWS_ROLE}} | |
role-session-name: gh-actions-${{github.run_id}}.${{github.run_number}}.${{github.run_attempt}}-cdk-deploy | |
aws-region: us-east-1 | |
- name: CDK validations (resource assertions and cdk diff) | |
run: make validate | |
- name: Deploy CDK Stack | |
run: make deploy ADD_CDK_ARGS="--require-approval never" | |
api-deploy-image-repo: | |
name: Deploy/update container image repository stack for API | |
concurrency: | |
group: ${{ github.workflow }}-api-deploy-image-repo | |
cancel-in-progress: false | |
needs: | |
- commit-deps-lock-updates | |
- on-deploy | |
- build-pavi-shared-aws-module | |
permissions: | |
id-token: write # This is required for requesting the JWT for gaining permissions to assume the IAM role to perform AWS actions | |
runs-on: ubuntu-22.04 | |
defaults: | |
run: | |
working-directory: api/aws_infra | |
steps: | |
- name: Check out repository code | |
uses: actions/checkout@v4 | |
with: | |
ref: ${{ needs.commit-deps-lock-updates.outputs.latest-commit-sha }} | |
- name: Setup node.js (CDK CLI requirement) | |
uses: actions/setup-node@v4 | |
with: | |
node-version: "20" | |
- name: Setup Python | |
uses: actions/setup-python@v5 | |
with: | |
python-version: "3.12" | |
- name: Download shared AWS package | |
uses: actions/download-artifact@v4 | |
with: | |
name: shared_aws_py_package | |
path: /tmp/ | |
- name: AWS credentials configuration | |
uses: aws-actions/configure-aws-credentials@v4 | |
with: | |
role-to-assume: ${{secrets.GH_ACTIONS_AWS_ROLE}} | |
role-session-name: gh-actions-${{github.run_id}}.${{github.run_number}}.${{github.run_attempt}}-cdk-deploy | |
aws-region: us-east-1 | |
- name: CDK validations (resource assertions and cdk diff) | |
run: make validate-image-stack | |
- name: Deploy CDK stack | |
run: make deploy-image-stack ADD_CDK_ARGS="--require-approval never" | |
webui-deploy-image-repo: | |
name: Deploy/update container image repository stack for web UI | |
concurrency: | |
group: ${{ github.workflow }}-webui-deploy-image-repo | |
cancel-in-progress: false | |
needs: | |
- commit-deps-lock-updates | |
- on-deploy | |
- build-pavi-shared-aws-module | |
permissions: | |
id-token: write # This is required for requesting the JWT for gaining permissions to assume the IAM role to perform AWS actions | |
runs-on: ubuntu-22.04 | |
defaults: | |
run: | |
working-directory: webui/aws_infra | |
steps: | |
- name: Check out repository code | |
uses: actions/checkout@v4 | |
with: | |
ref: ${{ needs.commit-deps-lock-updates.outputs.latest-commit-sha }} | |
- name: Setup node.js (CDK CLI requirement) | |
uses: actions/setup-node@v4 | |
with: | |
node-version: "20" | |
- name: Setup Python | |
uses: actions/setup-python@v5 | |
with: | |
python-version: "3.12" | |
- name: Download shared AWS package | |
uses: actions/download-artifact@v4 | |
with: | |
name: shared_aws_py_package | |
path: /tmp/ | |
- name: AWS credentials configuration | |
uses: aws-actions/configure-aws-credentials@v4 | |
with: | |
role-to-assume: ${{secrets.GH_ACTIONS_AWS_ROLE}} | |
role-session-name: gh-actions-${{github.run_id}}.${{github.run_number}}.${{github.run_attempt}}-cdk-deploy | |
aws-region: us-east-1 | |
- name: CDK validations (resource assertions and cdk diff) | |
run: make validate-image-stack | |
- name: Deploy CDK stack | |
run: make deploy-image-stack ADD_CDK_ARGS="--require-approval never" | |
pipeline-seq-retrieval-build-and-push-docker-image: | |
concurrency: | |
group: ${{ github.workflow }}-pipeline-seq-retrieval-build-and-push-docker-image | |
cancel-in-progress: false | |
needs: [on-deploy, pipeline-deploy-aws-infra, commit-deps-lock-updates] | |
permissions: | |
id-token: write # This is required for requesting the JWT for gaining permissions to assume the IAM role to perform AWS actions | |
runs-on: ubuntu-22.04 | |
env: | |
tagname: ${{ needs.commit-deps-lock-updates.outputs.git-describe }} | |
steps: | |
- name: Check out repository code | |
uses: actions/checkout@v4 | |
with: | |
ref: ${{ needs.commit-deps-lock-updates.outputs.latest-commit-sha }} | |
sparse-checkout: | | |
pipeline/seq_retrieval/ | |
# This step will configure environment variables to be used by all steps | |
# involving AWS interaction further down | |
- name: AWS credentials configuration | |
uses: aws-actions/configure-aws-credentials@v4 | |
with: | |
role-to-assume: ${{secrets.GH_ACTIONS_AWS_ROLE}} | |
role-session-name: gh-actions-${{github.run_id}}.${{github.run_number}}.${{github.run_attempt}}-build-image-pipeline-seq-retrieval | |
aws-region: us-east-1 | |
- name: Amazon ECR login | |
id: login-ecr | |
uses: aws-actions/amazon-ecr-login@v2 | |
- name: Build and push container image | |
uses: docker/build-push-action@v6 | |
env: | |
DOCKER_BUILD_SUMMARY: false | |
with: | |
context: ./pipeline/seq_retrieval/ | |
push: true | |
tags: | | |
${{ steps.login-ecr.outputs.registry }}/agr_pavi/pipeline_seq_retrieval:${{ env.tagname }} | |
${{ steps.login-ecr.outputs.registry }}/agr_pavi/pipeline_seq_retrieval:${{ github.event.pull_request.base.ref }} | |
platforms: linux/amd64 | |
pipeline-alignment-build-and-push-docker-image: | |
concurrency: | |
group: ${{ github.workflow }}-pipeline-alignment-build-and-push-docker-image | |
cancel-in-progress: false | |
needs: [on-deploy, pipeline-deploy-aws-infra, commit-deps-lock-updates] | |
permissions: | |
id-token: write # This is required for requesting the JWT for gaining permissions to assume the IAM role to perform AWS actions | |
runs-on: ubuntu-22.04 | |
env: | |
tagname: ${{ needs.commit-deps-lock-updates.outputs.git-describe }} | |
steps: | |
- name: Check out repository code | |
uses: actions/checkout@v4 | |
with: | |
ref: ${{ needs.commit-deps-lock-updates.outputs.latest-commit-sha }} | |
sparse-checkout: | | |
pipeline/alignment/ | |
# This step will configure environment variables to be used by all steps | |
# involving AWS interaction further down | |
- name: AWS credentials configuration | |
uses: aws-actions/configure-aws-credentials@v4 | |
with: | |
role-to-assume: ${{secrets.GH_ACTIONS_AWS_ROLE}} | |
role-session-name: gh-actions-${{github.run_id}}.${{github.run_number}}.${{github.run_attempt}}-build-image-pipeline-seq-retrieval | |
aws-region: us-east-1 | |
- name: Amazon ECR login | |
id: login-ecr | |
uses: aws-actions/amazon-ecr-login@v2 | |
- name: Build and push container image | |
uses: docker/build-push-action@v6 | |
env: | |
DOCKER_BUILD_SUMMARY: false | |
with: | |
context: ./pipeline/alignment/ | |
push: true | |
tags: | | |
${{ steps.login-ecr.outputs.registry }}/agr_pavi/pipeline_alignment:${{ env.tagname }} | |
${{ steps.login-ecr.outputs.registry }}/agr_pavi/pipeline_alignment:${{ github.event.pull_request.base.ref }} | |
platforms: linux/amd64 | |
api-build-and-push-docker-image: | |
concurrency: | |
group: ${{ github.workflow }}-api-build-and-push-docker-image | |
cancel-in-progress: false | |
needs: [on-deploy, api-deploy-image-repo, commit-deps-lock-updates] | |
permissions: | |
id-token: write # This is required for requesting the JWT for gaining permissions to assume the IAM role to perform AWS actions | |
runs-on: ubuntu-22.04 | |
env: | |
tagname: ${{ needs.commit-deps-lock-updates.outputs.git-describe }} | |
steps: | |
- name: Check out repository code | |
uses: actions/checkout@v4 | |
with: | |
ref: ${{ needs.commit-deps-lock-updates.outputs.latest-commit-sha }} | |
# This step will configure environment variables to be used by all steps | |
# involving AWS interaction further down | |
- name: AWS credentials configuration | |
uses: aws-actions/configure-aws-credentials@v4 | |
with: | |
role-to-assume: ${{secrets.GH_ACTIONS_AWS_ROLE}} | |
role-session-name: gh-actions-${{github.run_id}}.${{github.run_number}}.${{github.run_attempt}}-build-image-api | |
aws-region: us-east-1 | |
- name: Amazon ECR login | |
id: login-ecr | |
uses: aws-actions/amazon-ecr-login@v2 | |
- name: Build and push container image | |
uses: docker/build-push-action@v6 | |
env: | |
DOCKER_BUILD_SUMMARY: false | |
with: | |
context: ./ | |
file: api/Dockerfile | |
push: true | |
tags: | | |
${{ steps.login-ecr.outputs.registry }}/agr_pavi/api:${{ env.tagname }} | |
${{ steps.login-ecr.outputs.registry }}/agr_pavi/api:${{ github.event.pull_request.base.ref }} | |
platforms: linux/amd64 | |
webui-build-and-push-docker-image: | |
concurrency: | |
group: ${{ github.workflow }}-webui-build-and-push-docker-image | |
cancel-in-progress: false | |
needs: [on-deploy, webui-deploy-image-repo, commit-deps-lock-updates] | |
permissions: | |
id-token: write # This is required for requesting the JWT for gaining permissions to assume the IAM role to perform AWS actions | |
runs-on: ubuntu-22.04 | |
env: | |
tagname: ${{ needs.commit-deps-lock-updates.outputs.git-describe }} | |
steps: | |
- name: Check out repository code | |
uses: actions/checkout@v4 | |
with: | |
ref: ${{ needs.commit-deps-lock-updates.outputs.latest-commit-sha }} | |
# This step will configure environment variables to be used by all steps | |
# involving AWS interaction further down | |
- name: AWS credentials configuration | |
uses: aws-actions/configure-aws-credentials@v4 | |
with: | |
role-to-assume: ${{secrets.GH_ACTIONS_AWS_ROLE}} | |
role-session-name: gh-actions-${{github.run_id}}.${{github.run_number}}.${{github.run_attempt}}-build-image-webui | |
aws-region: us-east-1 | |
- name: Amazon ECR login | |
id: login-ecr | |
uses: aws-actions/amazon-ecr-login@v2 | |
- name: Build and push container image | |
uses: docker/build-push-action@v6 | |
env: | |
DOCKER_BUILD_SUMMARY: false | |
with: | |
context: ./webui/ | |
push: true | |
tags: | | |
${{ steps.login-ecr.outputs.registry }}/agr_pavi/webui:${{ env.tagname }} | |
${{ steps.login-ecr.outputs.registry }}/agr_pavi/webui:${{ github.event.pull_request.base.ref }} | |
platforms: linux/amd64 | |
deploy-application: | |
name: Deploy application (version) (API and WebUI) | |
concurrency: | |
group: ${{ github.workflow }}-deploy-application | |
cancel-in-progress: false | |
needs: | |
- on-deploy | |
- commit-deps-lock-updates | |
- build-pavi-shared-aws-module | |
- api-build-and-push-docker-image | |
- pipeline-alignment-build-and-push-docker-image | |
- pipeline-seq-retrieval-build-and-push-docker-image | |
- webui-build-and-push-docker-image | |
- deploy-shared-aws-infra | |
permissions: | |
id-token: write # This is required for requesting the JWT for gaining permissions to assume the IAM role to perform AWS actions | |
runs-on: ubuntu-22.04 | |
env: | |
tagname: ${{ needs.commit-deps-lock-updates.outputs.git-describe }} | |
steps: | |
- name: Check out repository code | |
uses: actions/checkout@v4 | |
with: | |
ref: ${{ needs.commit-deps-lock-updates.outputs.latest-commit-sha }} | |
- name: Setup node.js (CDK CLI requirement) | |
uses: actions/setup-node@v4 | |
with: | |
node-version: "20" | |
- name: Setup Python | |
uses: actions/setup-python@v5 | |
with: | |
python-version: "3.12" | |
- name: Download shared AWS package | |
uses: actions/download-artifact@v4 | |
with: | |
name: shared_aws_py_package | |
path: /tmp/ | |
- name: AWS credentials configuration | |
uses: aws-actions/configure-aws-credentials@v4 | |
with: | |
role-to-assume: ${{secrets.GH_ACTIONS_AWS_ROLE}} | |
role-session-name: gh-actions-${{github.run_id}}.${{github.run_number}}.${{github.run_attempt}}-app-cdk-deploy | |
aws-region: us-east-1 | |
# API validation and deployment | |
- name: API CDK validations (resource assertions and cdk diff) | |
working-directory: api/aws_infra | |
run: make validate-application-stack validate-environment-stack PAVI_DEPLOY_VERSION_LABEL="${{ env.tagname }}" PAVI_IMAGE_TAG="${{ env.tagname }}" | |
- name: Deploy API application (and version) | |
working-directory: api/aws_infra | |
run: make deploy-application PAVI_DEPLOY_VERSION_LABEL="${{ env.tagname }}" ADD_CDK_ARGS="--require-approval never" | |
- name: Deploy API to main environment | |
working-directory: api/aws_infra | |
run: make deploy-environment PAVI_DEPLOY_VERSION_LABEL="${{ env.tagname }}" PAVI_IMAGE_TAG="${{ env.tagname }}" \ | |
EB_ENV_CDK_STACK_NAME=PaviApiEbMainStack ADD_CDK_ARGS="--require-approval never" | |
# webUI validation and deployment | |
- name: webUI CDK validations (resource assertions and cdk diff) | |
working-directory: webui/aws_infra | |
run: make validate-application-stack validate-environment-stack PAVI_API_STACK_NAME="PaviApiEbMainStack" \ | |
PAVI_DEPLOY_VERSION_LABEL="${{ env.tagname }}" PAVI_IMAGE_TAG="${{ env.tagname }}" | |
- name: Deploy webUI application (and version) | |
working-directory: webui/aws_infra | |
run: make deploy-application PAVI_DEPLOY_VERSION_LABEL="${{ env.tagname }}" ADD_CDK_ARGS="--require-approval never" | |
- name: Deploy webUI to main environment | |
working-directory: webui/aws_infra | |
run: make deploy-environment PAVI_API_STACK_NAME="PaviApiEbMainStack" \ | |
PAVI_DEPLOY_VERSION_LABEL="${{ env.tagname }}" PAVI_IMAGE_TAG="${{ env.tagname }}" \ | |
EB_ENV_CDK_STACK_NAME=PaviWebUiEbMainStack ADD_CDK_ARGS="--require-approval never" |