first API - KANBAN-508 #28
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This fix to the seq_regions JSON encoding in nextflow processing voids the need for additional character escaping in the JSON input string. The file input option provides a shell-safe way of passing user input to the nextflow pipeline.
+ all required Dockerfile updates and updated run-api-server-dev target to enable running the API container locally.
…nextflow executables, configs and results
…posting (for later result retrieval)
…h pytest. Usefull to test deployed code or externally run API server (such as container).
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First API setup (and unit/integration testing)