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AR_3D_v5_June8_2014.pdf
AR_3D_v5_June8_2014.pdf
 
 
ARlocalization.m
ARlocalization.m
 
 
ARlocalization1.m
ARlocalization1.m
 
 
ARlocalization2.m
ARlocalization2.m
 
 
Alexandre MatovAACR2013.pdf
Alexandre MatovAACR2013.pdf
 
 
CTC.m
CTC.m
 
 
CircularHough_Grd.m
CircularHough_Grd.m
 
 
DrawCircle.m
DrawCircle.m
 
 
EB1_M12_AR.pdf
EB1_M12_AR.pdf
 
 
HoughCtc.m
HoughCtc.m
 
 
MTbundling.m
MTbundling.m
 
 
MTbundling3.m
MTbundling3.m
 
 
MTbundling5.m
MTbundling5.m
 
 
MTbundling6.m
MTbundling6.m
 
 
MTbundling7.m
MTbundling7.m
 
 
MatovGEDIcoverslipSegmentationContour.pdf
MatovGEDIcoverslipSegmentationContour.pdf
 
 
MatovMicrotubuleBundling2012.pdf
MatovMicrotubuleBundling2012.pdf
 
 
MatovMicrotubuleBundling2013.pdf
MatovMicrotubuleBundling2013.pdf
 
 
MatovPaclitaxelResistanceBRCA1BreastCancer_2012.pdf
MatovPaclitaxelResistanceBRCA1BreastCancer_2012.pdf
 
 
MatovResistanceBiomarkersCTCchip_2012.pdf
MatovResistanceBiomarkersCTCchip_2012.pdf
 
 
MatovSmallCTCs2014.pdf
MatovSmallCTCs2014.pdf
 
 
README.md
README.md
 
 
batchBundlingMatt.m
batchBundlingMatt.m
 
 
bundlingMT4.m
bundlingMT4.m
 
 
detectCTCs.m
detectCTCs.m
 
 
detectCTCs1.m
detectCTCs1.m
 
 
detectCTCs2.m
detectCTCs2.m
 
 
ergBundles.m
ergBundles.m
 
 

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The Matlab code I wrote for the analysis of treatment resistance and sensitivity biomarkers based on the drug-induced microtubule bundling and nuclear androgen receptor localization for the publications:

Matt Sung, Evi Giannakakou "BRCA1 Regulates Microtubule Dynamics and Taxane-Induced Apoptotic Cell Signaling (2014)" https://www.nature.com/articles/onc201385

Maria Thadani-Mulero, Luigi Portella, Shihua Sun, Matt Sung, Alex Matov, Bob Vessella, Eva Corey, David Nanus, Stephen Plymate, Evi Giannakakou "Androgen Receptor Splice Variants Determine Taxane Sensitivity in Prostate Cancer (2014)" https://aacrjournals.org/cancerres/article/74/8/2270/599363/Androgen-Receptor-Splice-Variants-Determine-Taxane

Please also refer to: http://dx.doi.org/10.13140/RG.2.2.36808.90886 (8 PDF files) and http://dx.doi.org/10.13140/RG.2.2.15239.37286 (8 PDF files)

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www.researchgate.net/publication/374544332_Automated_Enumeration_and_Analysis_of_Circulating_Tumor_Cells_from_Peripheral_Blood_of_Metastatic_Cancer_Patients_for_Diagnosis_and_Refinement_of_Therapy_2012-2015

Topics

voronoi-diagram biomarker-discovery breast-cancer prostate-cancer sobel-filter drug-response-prediction circulating-tumor-cells circular-hough-transform difference-of-gaussian gastric-cancer tubulin-inhibitors intensity-histogram-thresholding tubulin-bundling tubulin-tyrosination transcription-factor-localization stationary-wavelet-transform feature-eccentricity microfluidics-chip-enrichment brca1-drug-resistance paclitaxel-therapy

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