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Parsing issue in depth files #1

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jeffkimbrel opened this issue May 2, 2024 · 0 comments
Open

Parsing issue in depth files #1

jeffkimbrel opened this issue May 2, 2024 · 0 comments

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@jeffkimbrel
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Hello, I think the intention with the depth files was to have one file per segment, and 8 files per SRA study, but each of the 8 files is identical and has coverages for all 8 segments.

% md5sum SRR28752446*
3926bc54660ef5c807b8d9aa8658cd1f  SRR28752446_HA_depth.tsv
3926bc54660ef5c807b8d9aa8658cd1f  SRR28752446_MP_depth.tsv
3926bc54660ef5c807b8d9aa8658cd1f  SRR28752446_NA_depth.tsv
3926bc54660ef5c807b8d9aa8658cd1f  SRR28752446_NP_depth.tsv
3926bc54660ef5c807b8d9aa8658cd1f  SRR28752446_NS_depth.tsv
3926bc54660ef5c807b8d9aa8658cd1f  SRR28752446_PA_depth.tsv
3926bc54660ef5c807b8d9aa8658cd1f  SRR28752446_PB1_depth.tsv
3926bc54660ef5c807b8d9aa8658cd1f  SRR28752446_PB2_depth.tsv
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