HaploSync v1.0
Full version of HaploSync suite of tools.
Changes from v0.1beta
- Modular structure [new]
- Builds diploid pseudomolecule assemblies from draft sequences using:
- a genetic map [new]
- a chromosome scaled guide genome of a closely related species [improved]
- using both the genetic map and a guide genome [new]
- Compares alternative haplotypes to identify and correct misassemblies independently from any reference [new]
- Fills assembly gaps with un-placed sequences [new]
- Resolves collapsed homozygous regions. [new]
released with
Assembly of complete diploid phased chromosomes from draft genome sequences
Andrea Minio, Noé Cochetel, Amanda M Vondras, Mélanie Massonnet, Dario Cantu;
bioRxiv 2021.11.11.468134; doi: https://doi.org/10.1101/2021.11.11.468134
Full Changelog: V0.1beta...v1.0