Release v2.7.1

Bugfix: Compatibility with Pyhton3.6 and Python3.7

Release 2.7

Version 2.7

v2.6.1

Bugfix: Re-add missing functions to get single Omim diseases and Genes

v2.6

• Refactored Gene and Disease annotations
• Added proper hashing methods to HPOTerm, Disease and Gene
• Bugfix for similarity score when one set does not contain any HPOTerm

v2.5

• Added combination methods for HPOset similarities
• Added Matrix module for row/column based operations
• Changed keys in toJSON methods
• Data update to hp/releases/2020-10-12
  • HPO: 15530 ==> 15656
  • Genes: 4366 ==> 4484
  • OMIM: 7801 ==> 7860
  • Negative OMIM: 652 ==> 660
  • ORPHANET: 3956 ==> 3989
  • Negative ORPHANET: 255 ==> 259
  • DECIPHER: 47 ==> 47
  • Negative DECIPHER: 0 ==> 0

v2.2

Added Orphanet and Decipher diseases

v2.0.1

Bugfix release

v2.0

• Refactored Ontology to act as a singleton
  • Able to remove some weird dependencies when creating HPOSets
  • Refactored some unit tests to only temporarily mock methods
• Performance improvements through using more cached objects
• Making HPOSet an actual set
• Adding BasicHPOSet
• Handling obsolete terms

v1.4

• Added serialization to HPO Term and HPO Set
• Option to remove modifier from HPO Set
• Changed Omim and Gene to be Singletons

v1.3

Data update

• HPO: 14961 ==> 15332
• Genes: 4312 ==> 4317
• OMIM: 7623 ==> 7675
• Negative OMIM: 634 ==> 638