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module 'ark.phenotyping.post_cluster_utils' has no attribute 'generate_new_cluster_resolution' #1143

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c0urtneyt opened this issue Jun 19, 2024 · 1 comment
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@c0urtneyt
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Hello!
I am running 4_Post_Clustering, and when importing packages, I was unable to import 'ark.phenotyping.post_cluster_utils.generate_new_cluster_resoltuion'. I was looking at the documentation for post_cluster_utils and there is no generate_new_cluster_utils there.
I have tried running on both v0_5_2 and v0_6_4. Let me know if I am doing something wrong, thank you so much in advance!

@c0urtneyt c0urtneyt added the question Further information is requested label Jun 19, 2024
@cliu72
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cliu72 commented Jul 5, 2024

Hi @c0urtneyt! That function is here: https://github.com/angelolab/ark-analysis/blob/main/src/ark/phenotyping/post_cluster_utils.py#L174-L208 and was added in this pull request: #1095.

A new version of ark was recently released, v0.7.1 (https://github.com/angelolab/ark-analysis/releases) - try installing this version and running it again. Hope this helps!

@srivarra srivarra added this to the v0.8.0 Release milestone Oct 3, 2024
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