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Functional markers #1170

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smith6jt-cop opened this issue Oct 21, 2024 · 0 comments
Open

Functional markers #1170

smith6jt-cop opened this issue Oct 21, 2024 · 0 comments
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enhancement New feature or request

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@smith6jt-cop
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Is your feature request related to a problem? Please describe.
As it stands, the pipeline creates a boolean indication of functional markers for each cell to be used in the now removed pairwise enrichment notebook.

Describe the solution you'd like
Remove the portion of the ReadMe that refers to the notebook that isn't there anymore. Specify how the functional marker data can be incorporated into the analysis.

Describe alternatives you've considered
The SpaceCat repo could be used in this capacity with modifications of ark-analysis or parts of SpaceCat.
@smith6jt-cop smith6jt-cop added the enhancement New feature or request label Oct 21, 2024
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@smith6jt-cop