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[BUG]Pod role not correct for quite a long time after stop leader node #3575

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ahjing99 opened this issue Jun 5, 2023 · 0 comments · Fixed by #3971
Closed

[BUG]Pod role not correct for quite a long time after stop leader node #3575

ahjing99 opened this issue Jun 5, 2023 · 0 comments · Fixed by #3971
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@xuriwuyun @free6om
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bug kind/bug Something isn't working stability stability related issues
Milestone
Release 0.6.0

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@ahjing99
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ahjing99 commented Jun 5, 2023

➜ ~ kbcli version
Kubernetes: v1.25.8-gke.500
KubeBlocks: 0.6.0-alpha.10
kbcli: 0.6.0-alpha.10

  1. Before inject node stop ,yjtest-mysql-0 is the leader
  2. Stop the node where leader yjtest-mysql-0 reside
➜  ~ kbcli fault node stop gke-yjtest-default-pool-eaab2fad-bxg9 -c=gcp --region=us-central1-c --project=apecloud-platform-engineering
Secret cloud-key-secret-gcp exists under default namespace.
GCPChaos node-chaos-6rxhc created
  1. node stopped
➜  ~ kbcli cluster connect yjtest
Connect to instance yjtest-mysql-1: out of yjtest-mysql-1(leader), yjtest-mysql-2(follower)
mysql: [Warning] Using a password on the command line interface can be insecure.
Welcome to the MySQL monitor.  Commands end with ; or \g.
Your MySQL connection id is 75
Server version: 8.0.30 WeSQL Server - GPL, Release 5, Revision 3e93ae7
  1. node started，but the role of the original leader pod is not correct
➜  ~ kbcli cluster describe yjtest
Name: yjtest	 Created Time: Jun 05,2023 15:49 UTC+0800
NAMESPACE   CLUSTER-DEFINITION   VERSION           STATUS    TERMINATION-POLICY
default     apecloud-mysql       ac-mysql-8.0.30   Running   WipeOut

Endpoints:
COMPONENT   MODE        INTERNAL                                      EXTERNAL
mysql       ReadWrite   [yjtest-mysql.default.svc.cluster.local:3306](http://yjtest-mysql.default.svc.cluster.local:3306/)   <none>

Topology:
COMPONENT   INSTANCE         ROLE       STATUS    AZ              NODE                                                  CREATED-TIME
mysql       yjtest-mysql-0   leader     Running   us-central1-c   gke-yjtest-default-pool-eaab2fad-bxg9/[10.128.0.15](http://10.128.0.15/)     Jun 05,2023 15:49 UTC+0800
mysql       yjtest-mysql-1   leader     Running   us-central1-c   gke-yjtest-default-pool-eaab2fad-2618/[10.128.0.2](http://10.128.0.2/)      Jun 05,2023 15:49 UTC+0800
mysql       yjtest-mysql-2   follower   Running   us-central1-c   gke-yjtest-default-pool-eaab2fad-4rxv/[10.128.15.229](http://10.128.15.229/)   Jun 05,2023 15:49 UTC+0800

Resources Allocation:
COMPONENT   DEDICATED   CPU(REQUEST/LIMIT)   MEMORY(REQUEST/LIMIT)   STORAGE-SIZE   STORAGE-CLASS
mysql       false       2 / 2                8Gi / 8Gi               data:5Gi       standard-rwo

Images:
COMPONENT   TYPE    IMAGE
mysql       mysql   [registry.cn-hangzhou.aliyuncs.com/apecloud/apecloud-mysql-server:8.0.30-5.alpha8.20230523.g3e93ae7.8](http://registry.cn-hangzhou.aliyuncs.com/apecloud/apecloud-mysql-server:8.0.30-5.alpha8.20230523.g3e93ae7.8)

Data Protection:
AUTO-BACKUP   BACKUP-SCHEDULE   TYPE     BACKUP-TTL   LAST-SCHEDULE   RECOVERABLE-TIME
Disabled      <none>            <none>   7d           <none>          <none>

Show cluster events: kbcli cluster list-events -n default yjtest


➜  ~ kbcli cluster connect yjtest
Connect to instance yjtest-mysql-1: out of yjtest-mysql-1(leader), yjtest-mysql-2(follower)
mysql: [Warning] Using a password on the command line interface can be insecure.
Welcome to the MySQL monitor.  Commands end with ; or \g.
Your MySQL connection id is 192
Server version: 8.0.30 WeSQL Server - GPL, Release 5, Revision 3e93ae7

Copyright (c) 2000, 2022, Oracle and/or its affiliates.

Oracle is a registered trademark of Oracle Corporation and/or its
affiliates. Other names may be trademarks of their respective
owners.

Type 'help;' or '\h' for help. Type '\c' to clear the current input statement.

mysql> select * from information_schema.wesql_cluster_global;\
+-----------+--------------------------------------------+-------------+------------+----------+-----------+------------+-----------------+----------------+---------------+------------+--------------+
| SERVER_ID | IP_PORT                                    | MATCH_INDEX | NEXT_INDEX | ROLE     | HAS_VOTED | FORCE_SYNC | ELECTION_WEIGHT | LEARNER_SOURCE | APPLIED_INDEX | PIPELINING | SEND_APPLIED |
+-----------+--------------------------------------------+-------------+------------+----------+-----------+------------+-----------------+----------------+---------------+------------+--------------+
|         1 | yjtest-mysql-0.yjtest-mysql-headless:13306 |          17 |         18 | Follower | No        | No         |               5 |              0 |            16 | Yes        | No           |
|         2 | yjtest-mysql-1.yjtest-mysql-headless:13306 |          17 |          0 | Leader   | Yes       | No         |               5 |              0 |            14 | No         | No           |
|         3 | yjtest-mysql-2.yjtest-mysql-headless:13306 |          17 |         18 | Follower | Yes       | No         |               5 |              0 |            15 | Yes        | No           |
+-----------+--------------------------------------------+-------------+------------+----------+-----------+------------+-----------------+----------------+---------------+------------+--------------+
3 rows in set (0.00 sec)


➜  ~ k describe pod yjtest-mysql-0
Name:         yjtest-mysql-0
Namespace:    default
Priority:     0
Node:         gke-yjtest-default-pool-eaab2fad-bxg9/10.128.0.15
Start Time:   Mon, 05 Jun 2023 15:49:22 +0800
Labels:       app.kubernetes.io/component=mysql
              app.kubernetes.io/instance=yjtest
              app.kubernetes.io/managed-by=kubeblocks
              app.kubernetes.io/name=apecloud-mysql
              app.kubernetes.io/version=ac-mysql-8.0.30
              apps.kubeblocks.io/component-name=mysql
              apps.kubeblocks.io/workload-type=Consensus
              controller-revision-hash=yjtest-mysql-7f5dfc5c59
              cs.apps.kubeblocks.io/access-mode=ReadWrite
              kubeblocks.io/role=leader
              statefulset.kubernetes.io/pod-name=yjtest-mysql-0
Annotations:  apps.kubeblocks.io/component-replicas: 3
              cs.apps.kubeblocks.io/leader: yjtest-mysql-1
Status:       Running
IP:           10.104.2.5
IPs:
  IP:           10.104.2.5
Controlled By:  StatefulSet/yjtest-mysql
Containers:
  mysql:
    Container ID:  containerd://910f94f0c0cb0e4bd7829482bd97a320e07472210dd1bb8a4521c72e70dece82
    Image:         registry.cn-hangzhou.aliyuncs.com/apecloud/apecloud-mysql-server:8.0.30-5.alpha8.20230523.g3e93ae7.8
    Image ID:      registry.cn-hangzhou.aliyuncs.com/apecloud/apecloud-mysql-server@sha256:5f68384d13b931956ff7e1726f90e71dd956a582136db6cf824ad48ef5e0ec74
    Ports:         3306/TCP, 13306/TCP
    Host Ports:    0/TCP, 0/TCP
    Command:
      /scripts/setup.sh
    State:          Running
      Started:      Mon, 05 Jun 2023 16:13:45 +0800
    Ready:          True
    Restart Count:  0
    Limits:
      cpu:     2
      memory:  8Gi
    Requests:
      cpu:     2
      memory:  8Gi
    Environment Variables from:
      yjtest-mysql-env  ConfigMap  Optional: false
    Environment:
      KB_POD_NAME:               yjtest-mysql-0 (v1:metadata.name)
      KB_POD_UID:                 (v1:metadata.uid)
      KB_NAMESPACE:              default (v1:metadata.namespace)
      KB_SA_NAME:                 (v1:spec.serviceAccountName)
      KB_NODENAME:                (v1:spec.nodeName)
      KB_HOST_IP:                 (v1:status.hostIP)
      KB_POD_IP:                  (v1:status.podIP)
      KB_POD_IPS:                 (v1:status.podIPs)
      KB_HOSTIP:                  (v1:status.hostIP)
      KB_PODIP:                   (v1:status.podIP)
      KB_PODIPS:                  (v1:status.podIPs)
      KB_CLUSTER_NAME:           yjtest
      KB_COMP_NAME:              mysql
      KB_CLUSTER_COMP_NAME:      yjtest-mysql
      KB_CLUSTER_UID_POSTFIX_8:  59b2d2f2
      KB_POD_FQDN:               $(KB_POD_NAME).$(KB_CLUSTER_COMP_NAME)-headless.$(KB_NAMESPACE).svc
      MYSQL_ROOT_HOST:           %
      MYSQL_ROOT_USER:           <set to the key 'username' in secret 'yjtest-conn-credential'>  Optional: false
      MYSQL_ROOT_PASSWORD:       <set to the key 'password' in secret 'yjtest-conn-credential'>  Optional: false
      MYSQL_DATABASE:            mydb
      MYSQL_USER:                u1
      MYSQL_PASSWORD:            u1
      CLUSTER_ID:                1
      CLUSTER_START_INDEX:       1
      REPLICATION_USER:          replicator
      REPLICATION_PASSWORD:
      MYSQL_TEMPLATE_CONFIG:
      MYSQL_CUSTOM_CONFIG:
      MYSQL_DYNAMIC_CONFIG:
      KB_EMBEDDED_WESQL:         1
    Mounts:
      /data/mysql from data (rw)
      /etc/annotations from annotations (rw)
      /opt/mysql from mysql-config (rw)
      /scripts from scripts (rw)
      /var/run/secrets/kubernetes.io/serviceaccount from kube-api-access-z79cn (ro)
  metrics:
    Container ID:  containerd://6f97a649c695756dbea22edb51ec7e106d3eb1222eb3e95f915a0b4b393e0b3f
    Image:         registry.cn-hangzhou.aliyuncs.com/apecloud/mysqld-exporter:0.14.1
    Image ID:      registry.cn-hangzhou.aliyuncs.com/apecloud/mysqld-exporter@sha256:8a394d7e722a3c6be7082485eafb4c4082af6f2caf49b30446472ffeedc2ea28
    Port:          9104/TCP
    Host Port:     0/TCP
    Command:
      /bin/mysqld_exporter
      --collect.info_schema.wesql_consensus
    State:          Running
      Started:      Mon, 05 Jun 2023 16:13:59 +0800
    Ready:          True
    Restart Count:  0
    Liveness:       http-get http://:http-metrics/ delay=5s timeout=5s period=10s #success=1 #failure=6
    Readiness:      http-get http://:http-metrics/ delay=5s timeout=5s period=10s #success=1 #failure=6
    Environment Variables from:
      yjtest-mysql-env  ConfigMap  Optional: false
    Environment:
      KB_POD_NAME:               yjtest-mysql-0 (v1:metadata.name)
      KB_POD_UID:                 (v1:metadata.uid)
      KB_NAMESPACE:              default (v1:metadata.namespace)
      KB_SA_NAME:                 (v1:spec.serviceAccountName)
      KB_NODENAME:                (v1:spec.nodeName)
      KB_HOST_IP:                 (v1:status.hostIP)
      KB_POD_IP:                  (v1:status.podIP)
      KB_POD_IPS:                 (v1:status.podIPs)
      KB_HOSTIP:                  (v1:status.hostIP)
      KB_PODIP:                   (v1:status.podIP)
      KB_PODIPS:                  (v1:status.podIPs)
      KB_CLUSTER_NAME:           yjtest
      KB_COMP_NAME:              mysql
      KB_CLUSTER_COMP_NAME:      yjtest-mysql
      KB_CLUSTER_UID_POSTFIX_8:  59b2d2f2
      KB_POD_FQDN:               $(KB_POD_NAME).$(KB_CLUSTER_COMP_NAME)-headless.$(KB_NAMESPACE).svc
      MYSQL_USER:                <set to the key 'username' in secret 'yjtest-conn-credential'>  Optional: false
      MYSQL_PASSWORD:            <set to the key 'password' in secret 'yjtest-conn-credential'>  Optional: false
      DATA_SOURCE_NAME:          $(MYSQL_USER):$(MYSQL_PASSWORD)@(localhost:3306)/
    Mounts:
      /var/run/secrets/kubernetes.io/serviceaccount from kube-api-access-z79cn (ro)
  kb-checkrole:
    Container ID:  containerd://6e56b1c9d631f81941159b04708d448b950cde11a7588aaa27fc48f33aa31179
    Image:         registry.cn-hangzhou.aliyuncs.com/apecloud/kubeblocks-tools:0.6.0-alpha.10
    Image ID:      registry.cn-hangzhou.aliyuncs.com/apecloud/kubeblocks-tools@sha256:b9d86f3c8ae72a8609ba50ec65d6b71e84734e25d81f160383aef1eba693b6e4
    Ports:         3501/TCP, 50001/TCP
    Host Ports:    0/TCP, 0/TCP
    Command:
      probe
      --app-id
      batch-sdk
      --dapr-http-port
      3501
      --dapr-grpc-port
      50001
      --log-level
      info
      --config
      /config/probe/config.yaml
      --components-path
      /config/probe/components
    State:          Running
      Started:      Mon, 05 Jun 2023 16:14:27 +0800
    Ready:          True
    Restart Count:  0
    Readiness:      exec [curl -X POST --max-time 1 --fail-with-body --silent -H Content-ComponentDefRef: application/json http://localhost:3501/v1.0/bindings/mysql -d {"operation": "checkRole", "metadata":{"sql":""}}] delay=0s timeout=1s period=1s #success=1 #failure=2
    Startup:        tcp-socket :3501 delay=0s timeout=1s period=10s #success=1 #failure=3
    Environment Variables from:
      yjtest-mysql-env  ConfigMap  Optional: false
    Environment:
      KB_POD_NAME:                yjtest-mysql-0 (v1:metadata.name)
      KB_POD_UID:                  (v1:metadata.uid)
      KB_NAMESPACE:               default (v1:metadata.namespace)
      KB_SA_NAME:                  (v1:spec.serviceAccountName)
      KB_NODENAME:                 (v1:spec.nodeName)
      KB_HOST_IP:                  (v1:status.hostIP)
      KB_POD_IP:                   (v1:status.podIP)
      KB_POD_IPS:                  (v1:status.podIPs)
      KB_HOSTIP:                   (v1:status.hostIP)
      KB_PODIP:                    (v1:status.podIP)
      KB_PODIPS:                   (v1:status.podIPs)
      KB_CLUSTER_NAME:            yjtest
      KB_COMP_NAME:               mysql
      KB_CLUSTER_COMP_NAME:       yjtest-mysql
      KB_CLUSTER_UID_POSTFIX_8:   59b2d2f2
      KB_POD_FQDN:                $(KB_POD_NAME).$(KB_CLUSTER_COMP_NAME)-headless.$(KB_NAMESPACE).svc
      KB_SERVICE_USER:            <set to the key 'username' in secret 'yjtest-conn-credential'>  Optional: false
      KB_SERVICE_PASSWORD:        <set to the key 'password' in secret 'yjtest-conn-credential'>  Optional: false
      KB_SERVICE_PORT:            3306
      KB_SERVICE_ROLES:           {"follower":"Readonly","leader":"ReadWrite","learner":"Readonly"}
      KB_SERVICE_CHARACTER_TYPE:  mysql
    Mounts:
      /var/run/secrets/kubernetes.io/serviceaccount from kube-api-access-z79cn (ro)
  config-manager:
    Container ID:  containerd://30dabd11e3b933123bd2bbd077b8806c8413281a487c32adc8ebf7bc64632ebf
    Image:         registry.cn-hangzhou.aliyuncs.com/apecloud/kubeblocks-tools:0.6.0-alpha.10
    Image ID:      registry.cn-hangzhou.aliyuncs.com/apecloud/kubeblocks-tools@sha256:b9d86f3c8ae72a8609ba50ec65d6b71e84734e25d81f160383aef1eba693b6e4
    Port:          <none>
    Host Port:     <none>
    Command:
      /bin/reloader
    Args:
      --operator-update-enable
      --log-level
      info
      --tcp
      9901
      --notify-type
      tpl
      --tpl-config
      /opt/config/reload/reload.yaml
    State:          Running
      Started:      Mon, 05 Jun 2023 16:14:27 +0800
    Ready:          True
    Restart Count:  0
    Environment:
      CONFIG_MANAGER_POD_IP:   (v1:status.podIP)
      DB_TYPE:                mysql
      MYSQL_USER:             <set to the key 'username' in secret 'yjtest-conn-credential'>  Optional: false
      MYSQL_PASSWORD:         <set to the key 'password' in secret 'yjtest-conn-credential'>  Optional: false
      DATA_SOURCE_NAME:       $(MYSQL_USER):$(MYSQL_PASSWORD)@(localhost:3306)/
    Mounts:
      /opt/config/reload from reload-manager-reload (rw)
      /opt/mysql from mysql-config (rw)
      /var/run/secrets/kubernetes.io/serviceaccount from kube-api-access-z79cn (ro)
Conditions:
  Type              Status
  Initialized       True
  Ready             True
  ContainersReady   True
  PodScheduled      True
Volumes:
  data:
    Type:       PersistentVolumeClaim (a reference to a PersistentVolumeClaim in the same namespace)
    ClaimName:  data-yjtest-mysql-0
    ReadOnly:   false
  annotations:
    Type:  DownwardAPI (a volume populated by information about the pod)
    Items:
      metadata.annotations['cs.apps.kubeblocks.io/leader'] -> leader
      metadata.annotations['apps.kubeblocks.io/component-replicas'] -> component-replicas
  scripts:
    Type:      ConfigMap (a volume populated by a ConfigMap)
    Name:      yjtest-mysql-apecloud-mysql-scripts
    Optional:  false
  mysql-config:
    Type:      ConfigMap (a volume populated by a ConfigMap)
    Name:      yjtest-mysql-mysql-consensusset-config
    Optional:  false
  reload-manager-reload:
    Type:      ConfigMap (a volume populated by a ConfigMap)
    Name:      mysql-reload-script-yjtest
    Optional:  false
  kube-api-access-z79cn:
    Type:                    Projected (a volume that contains injected data from multiple sources)
    TokenExpirationSeconds:  3607
    ConfigMapName:           kube-root-ca.crt
    ConfigMapOptional:       <nil>
    DownwardAPI:             true
QoS Class:                   Burstable
Node-Selectors:              <none>
Tolerations:                 kb-data=true:NoSchedule
                             node.kubernetes.io/not-ready:NoExecute op=Exists for 300s
                             node.kubernetes.io/unreachable:NoExecute op=Exists for 300s
Events:
  Type     Reason                  Age                From                     Message
  ----     ------                  ----               ----                     -------
  Normal   Scheduled               51m                default-scheduler        Successfully assigned default/yjtest-mysql-0 to gke-yjtest-default-pool-eaab2fad-bxg9
  Normal   SuccessfulAttachVolume  51m                attachdetach-controller  AttachVolume.Attach succeeded for volume "pvc-caa4a7d5-37d1-44ab-844b-b46e8bc15243"
  Normal   Started                 51m                kubelet                  Started container metrics
  Normal   Created                 51m                kubelet                  Created container mysql
  Normal   Started                 51m                kubelet                  Started container mysql
  Normal   Pulled                  51m                kubelet                  Container image "registry.cn-hangzhou.aliyuncs.com/apecloud/mysqld-exporter:0.14.1" already present on machine
  Normal   Created                 51m                kubelet                  Created container metrics
  Normal   Pulled                  51m                kubelet                  Container image "registry.cn-hangzhou.aliyuncs.com/apecloud/apecloud-mysql-server:8.0.30-5.alpha8.20230523.g3e93ae7.8" already present on machine
  Normal   Pulled                  51m                kubelet                  Container image "registry.cn-hangzhou.aliyuncs.com/apecloud/kubeblocks-tools:0.6.0-alpha.10" already present on machine
  Normal   Created                 51m                kubelet                  Created container kb-checkrole
  Normal   Started                 51m                kubelet                  Started container kb-checkrole
  Normal   Pulled                  51m                kubelet                  Container image "registry.cn-hangzhou.aliyuncs.com/apecloud/kubeblocks-tools:0.6.0-alpha.10" already present on machine
  Normal   Created                 51m                kubelet                  Created container config-manager
  Normal   Started                 51m                kubelet                  Started container config-manager
  Normal   checkRole               51m                sqlchannel               {"event":"Success","operation":"checkRole","originalRole":"","role":"Follower"}
  Normal   checkRole               49m                sqlchannel               {"event":"Success","operation":"checkRole","originalRole":"Follower","role":"Leader"}
  Warning  NodeNotReady            30m                node-controller          Node is not ready
  Warning  NetworkNotReady         28m                kubelet                  network is not ready: container runtime network not ready: NetworkReady=false reason:NetworkPluginNotReady message:Network plugin returns error: cni plugin not initialized
  Warning  FailedMount             28m                kubelet                  MountVolume.SetUp failed for volume "mysql-config" : failed to sync configmap cache: timed out waiting for the condition
  Warning  FailedMount             28m                kubelet                  MountVolume.SetUp failed for volume "reload-manager-reload" : failed to sync configmap cache: timed out waiting for the condition
  Warning  FailedMount             27m (x6 over 28m)  kubelet                  MountVolume.NodeAffinity check failed for volume "pvc-caa4a7d5-37d1-44ab-844b-b46e8bc15243" : no matching NodeSelectorTerms
  Normal   Pulling                 27m                kubelet                  Pulling image "registry.cn-hangzhou.aliyuncs.com/apecloud/apecloud-mysql-server:8.0.30-5.alpha8.20230523.g3e93ae7.8"
  Normal   Started                 27m                kubelet                  Started container mysql
  Normal   Pulling                 27m                kubelet                  Pulling image "registry.cn-hangzhou.aliyuncs.com/apecloud/mysqld-exporter:0.14.1"
  Normal   Pulled                  27m                kubelet                  Successfully pulled image "registry.cn-hangzhou.aliyuncs.com/apecloud/apecloud-mysql-server:8.0.30-5.alpha8.20230523.g3e93ae7.8" in 30.682453577s (30.682461217s including waiting)
  Normal   Created                 27m                kubelet                  Created container mysql
  Normal   Pulled                  26m                kubelet                  Successfully pulled image "registry.cn-hangzhou.aliyuncs.com/apecloud/mysqld-exporter:0.14.1" in 14.588519462s (14.588534531s including waiting)
  Normal   Created                 26m                kubelet                  Created container metrics
  Normal   Pulling                 26m                kubelet                  Pulling image "registry.cn-hangzhou.aliyuncs.com/apecloud/kubeblocks-tools:0.6.0-alpha.10"
  Normal   Started                 26m                kubelet                  Started container metrics
  Normal   Started                 26m                kubelet                  Started container kb-checkrole
  Normal   Pulled                  26m                kubelet                  Container image "registry.cn-hangzhou.aliyuncs.com/apecloud/kubeblocks-tools:0.6.0-alpha.10" already present on machine
  Normal   Created                 26m                kubelet                  Created container config-manager
  Normal   Started                 26m                kubelet                  Started container config-manager
  Normal   Created                 26m                kubelet                  Created container kb-checkrole
  Normal   Pulled                  26m                kubelet                  Successfully pulled image "registry.cn-hangzhou.aliyuncs.com/apecloud/kubeblocks-tools:0.6.0-alpha.10" in 27.195377504s (27.195396896s including waiting)

➜ ~ k logs yjtest-mysql-0 -c kb-checkrole >kb.log
kb.log
@ahjing99 ahjing99 added the kind/bug Something isn't working label Jun 5, 2023
@ahjing99 ahjing99 added this to the Release 0.6.0 milestone Jun 5, 2023
@lynnleelhl lynnleelhl assigned free6om and unassigned lynnleelhl Jun 5, 2023
@xuriwuyun xuriwuyun linked a pull request Jun 27, 2023 that will close this issue
fix: mongodb pod terminating takes too long time #3971
Merged
@ahjing99 ahjing99 added the stability stability related issues label Jul 10, 2023
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fix: mongodb pod terminating takes too long time apecloud/kubeblocks
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@xuriwuyun @lynnleelhl @free6om @ahjing99 @apecloud-bot