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small modif
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svittoz committed Mar 12, 2024
1 parent 02a15d8 commit 53b9ea6
Showing 1 changed file with 6 additions and 6 deletions.
12 changes: 6 additions & 6 deletions docs/functionalities/biology/quick-use.md
Original file line number Diff line number Diff line change
Expand Up @@ -17,16 +17,16 @@ from eds_scikit.biology import prepare_measurement_table, ConceptsSet
custom_leukocytes = ConceptsSet("Custom_Leukocytes")

custom_leukocytes.add_concept_codes(
concept_codes=["A0174", "H6740"], terminology="GLIMS_ANABIO"
) # (1)
concept_codes=["A0174", "H6740"], terminology="GLIMS_ANABIO" # (1)
)

custom_leukocytes.add_concept_codes(
concept_codes=["6690-2"], terminology="ITM_LOINC"
) # (2)
concept_codes=["6690-2"], terminology="ITM_LOINC" # (2)
)
```

1. Codes must be given with terminology. See. [measurement_config](/reference/io/settings/) for details on terminologies relationship.
2. Codes must be given with terminology. See. [measurement_config](/reference/io/settings/) for details on terminologies relationship.
1. Codes must be given with terminology. Available terminologies can be accessed with ```python eds_scikit.io.settings.measurement_config['source_terminologies']```. See. [AP-HP biology](https://id-pages.eds.aphp.fr/pfm/bigdata/eds-central-database/latest/vocabularies_concepts/biology/) for details on the AP-HP setting.
2. Codes must be given with terminology. Available terminologies can be accessed with ```python eds_scikit.io.settings.measurement_config['source_terminologies']```. See. [AP-HP biology](https://id-pages.eds.aphp.fr/pfm/bigdata/eds-central-database/latest/vocabularies_concepts/biology/) for details on the AP-HP setting.

### Preparing measurement table

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