Merge branch 'main' into dev/cal-poisson-nodewise-csr-3d-support

arcaneframework · Oct 10, 2024 · 306beae · 306beae
2 parents 2daf464 + cbbf0e3
commit 306beae
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Showing 25 changed files with 613 additions and 191 deletions.
diff --git a/.github/codecov.yml b/.github/codecov.yml
@@ -0,0 +1,15 @@
+coverage:
+  precision: 2
+  range:
+    - 65.0
+    - 100.0
+  round: down
+  status:
+    project:
+      default:
+        target: 70%
+        threshold: 10%
+    patch:
+      default:
+        target: 50%
+        threshold: 10%
diff --git a/.github/workflows/acoustics.yml b/.github/workflows/acoustics.yml
@@ -12,13 +12,9 @@ on:
   workflow_dispatch:
 
 env:
-
-  SOURCE_DIR: '/__w/arcanefem/arcanefem/src'
-  BUILD_DIR: '/__w/arcanefem/arcanefem/build'
   MODULE_DIR: 'acoustics'
 
   # CTest
-  CT_RESULT_DIR: '/__w/arcanefem/arcanefem/test'
   CT_OPTS: "--timeout 300 --output-on-failure"
 
   # MPI
@@ -31,11 +27,18 @@ jobs:
     name: 'Build and Test'
     runs-on: ubuntu-latest
     container:
-      image: ghcr.io/arcaneframework/arcane_ubuntu-2204:gcc-12_full_check_latest
+      image: ghcr.io/arcaneframework/arcane_ubuntu-2404:gcc-14_full_check_latest
 
     steps:
+      - name: Define environment paths
+        shell: bash
+        run: |
+          echo "SOURCE_DIR=${GITHUB_WORKSPACE}/src" >> $GITHUB_ENV
+          echo "BUILD_DIR=${GITHUB_WORKSPACE}/build" >> $GITHUB_ENV
+          echo "CT_RESULT_DIR=${GITHUB_WORKSPACE}/test" >> $GITHUB_ENV
+
       - name: Checkout repo
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           path: ${{ env.SOURCE_DIR }}
 
@@ -59,7 +62,7 @@ jobs:
           ctest --test-dir ${{ env.BUILD_DIR }} --output-junit ${{ env.CT_RESULT_DIR }}/results.xml ${{ env.CT_OPTS }} -R '\[${{ env.MODULE_DIR }}\]'
 
       - name: Upload test artifact
-        uses: actions/upload-artifact@v3
+        uses: actions/upload-artifact@v4
         if: failure()
         with:
           name: tests-${{ env.MODULE_DIR }}-artifact

diff --git a/.github/workflows/aerodynamics.yml b/.github/workflows/aerodynamics.yml
@@ -12,13 +12,9 @@ on:
   workflow_dispatch:
 
 env:
-
-  SOURCE_DIR: '/__w/arcanefem/arcanefem/src'
-  BUILD_DIR: '/__w/arcanefem/arcanefem/build'
   MODULE_DIR: 'aerodynamics'
 
   # CTest
-  CT_RESULT_DIR: '/__w/arcanefem/arcanefem/test'
   CT_OPTS: "--timeout 300 --output-on-failure"
 
   # MPI
@@ -31,11 +27,18 @@ jobs:
     name: 'Build and Test'
     runs-on: ubuntu-latest
     container:
-      image: ghcr.io/arcaneframework/arcane_ubuntu-2204:gcc-12_full_check_latest
+      image: ghcr.io/arcaneframework/arcane_ubuntu-2404:gcc-14_full_check_latest
 
     steps:
+      - name: Define environment paths
+        shell: bash
+        run: |
+          echo "SOURCE_DIR=${GITHUB_WORKSPACE}/src" >> $GITHUB_ENV
+          echo "BUILD_DIR=${GITHUB_WORKSPACE}/build" >> $GITHUB_ENV
+          echo "CT_RESULT_DIR=${GITHUB_WORKSPACE}/test" >> $GITHUB_ENV
+
       - name: Checkout repo
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           path: ${{ env.SOURCE_DIR }}
 
@@ -59,7 +62,7 @@ jobs:
           ctest --test-dir ${{ env.BUILD_DIR }} --output-junit ${{ env.CT_RESULT_DIR }}/results.xml ${{ env.CT_OPTS }} -R '\[${{ env.MODULE_DIR }}\]'
 
       - name: Upload test artifact
-        uses: actions/upload-artifact@v3
+        uses: actions/upload-artifact@v4
         if: failure()
         with:
           name: tests-${{ env.MODULE_DIR }}-artifact

diff --git a/.github/workflows/bilaplacian.yml b/.github/workflows/bilaplacian.yml
@@ -12,13 +12,9 @@ on:
   workflow_dispatch:
 
 env:
-
-  SOURCE_DIR: '/__w/arcanefem/arcanefem/src'
-  BUILD_DIR: '/__w/arcanefem/arcanefem/build'
   MODULE_DIR: 'bilaplacian'
 
   # CTest
-  CT_RESULT_DIR: '/__w/arcanefem/arcanefem/test'
   CT_OPTS: "--timeout 300 --output-on-failure"
 
   # MPI
@@ -31,11 +27,18 @@ jobs:
     name: 'Build and Test'
     runs-on: ubuntu-latest
     container:
-      image: ghcr.io/arcaneframework/arcane_ubuntu-2204:gcc-12_full_check_latest
+      image: ghcr.io/arcaneframework/arcane_ubuntu-2404:gcc-14_full_check_latest
 
     steps:
+      - name: Define environment paths
+        shell: bash
+        run: |
+          echo "SOURCE_DIR=${GITHUB_WORKSPACE}/src" >> $GITHUB_ENV
+          echo "BUILD_DIR=${GITHUB_WORKSPACE}/build" >> $GITHUB_ENV
+          echo "CT_RESULT_DIR=${GITHUB_WORKSPACE}/test" >> $GITHUB_ENV
+
       - name: Checkout repo
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           path: ${{ env.SOURCE_DIR }}
 
@@ -59,7 +62,7 @@ jobs:
           ctest --test-dir ${{ env.BUILD_DIR }} --output-junit ${{ env.CT_RESULT_DIR }}/results.xml ${{ env.CT_OPTS }} -R '\[${{ env.MODULE_DIR }}\]'
 
       - name: Upload test artifact
-        uses: actions/upload-artifact@v3
+        uses: actions/upload-artifact@v4
         if: failure()
         with:
           name: tests-${{ env.MODULE_DIR }}-artifact

diff --git a/.github/workflows/codecov.yml b/.github/workflows/codecov.yml
@@ -0,0 +1,87 @@
+name: 'Codecov Scan'
+
+on:
+  schedule:
+    - cron: '24 0 * * *'
+  pull_request:
+    branches: [ main ]
+  workflow_dispatch:
+
+env:
+  # CTest
+  CT_OPTS: "--timeout 300 --output-on-failure"
+
+  # MPI
+  OMPI_ALLOW_RUN_AS_ROOT: 1
+  OMPI_ALLOW_RUN_AS_ROOT_CONFIRM: 1
+  OMPI_MCA_rmaps_base_oversubscribe: 1
+
+jobs:
+  tests:
+    name: 'Build and Test'
+    runs-on: ubuntu-latest
+    container:
+      image: ghcr.io/arcaneframework/arcane_ubuntu-2404:gcc-14_full_release_latest
+
+    steps:
+      # On place la source à la racine pour éviter
+      # un sous-répertoire en plus dans Codecov.
+      - name: Define environment paths
+        shell: bash
+        run: |
+          echo "SOURCE_DIR=${GITHUB_WORKSPACE}" >> $GITHUB_ENV
+          echo "BUILD_DIR=${GITHUB_WORKSPACE}/build" >> $GITHUB_ENV
+          echo "CT_RESULT_DIR=${GITHUB_WORKSPACE}/test" >> $GITHUB_ENV
+
+      - name: Checkout repo
+        uses: actions/checkout@v4
+        with:
+          path: ${{ env.SOURCE_DIR }}
+
+      - name: Configure
+        shell: bash
+        run: |
+          cmake \
+          -S ${{ env.SOURCE_DIR }} \
+          -B ${{ env.BUILD_DIR }} \
+          -DCMAKE_BUILD_TYPE=Release \
+          -DCMAKE_CXX_FLAGS_RELEASE="-O2 -g --coverage -fprofile-abs-path -ftest-coverage" \
+          -GNinja
+
+      - name: Build
+        shell: bash
+        run: |
+          cmake --build ${{ env.BUILD_DIR }}
+
+      - name: Test
+        shell: bash
+        run: |
+          mkdir -p ${{ env.CT_RESULT_DIR }}
+          ctest --test-dir ${{ env.BUILD_DIR }} --output-junit ${{ env.CT_RESULT_DIR }}/results.xml ${{ env.CT_OPTS }}
+
+      - name: Apply coverage
+        shell: bash
+        continue-on-error: true
+        run: |
+          gcov -p $(find . -name "*.gcno" -o -name "*.gcda")
+
+      - name: Remove gcov files for generated axl .h
+        shell: bash
+        run: |
+          rm -v -f *_axl.h.gcov
+
+      - name: Upload coverage files to Codecov
+        uses: codecov/codecov-action@v4
+        env:
+          CODECOV_TOKEN : ${{ secrets.CODECOV_TOKEN }}
+        with:
+          verbose: true
+          fail_ci_if_error: true
+
+      - name: Upload test artifact
+        uses: actions/upload-artifact@v4
+        if: failure()
+        with:
+          name: test-all-modules-artifact
+          path: ${{ env.CT_RESULT_DIR }}
+          retention-days: 7
diff --git a/.github/workflows/elasticity.yml b/.github/workflows/elasticity.yml
@@ -12,13 +12,9 @@ on:
   workflow_dispatch:
 
 env:
-
-  SOURCE_DIR: '/__w/arcanefem/arcanefem/src'
-  BUILD_DIR: '/__w/arcanefem/arcanefem/build'
   MODULE_DIR: 'elasticity'
 
   # CTest
-  CT_RESULT_DIR: '/__w/arcanefem/arcanefem/test'
   CT_OPTS: "--timeout 300 --output-on-failure"
 
   # MPI
@@ -31,11 +27,18 @@ jobs:
     name: 'Build and Test'
     runs-on: ubuntu-latest
     container:
-      image: ghcr.io/arcaneframework/arcane_ubuntu-2204:gcc-12_full_check_latest
+      image: ghcr.io/arcaneframework/arcane_ubuntu-2404:gcc-14_full_check_latest
 
     steps:
+      - name: Define environment paths
+        shell: bash
+        run: |
+          echo "SOURCE_DIR=${GITHUB_WORKSPACE}/src" >> $GITHUB_ENV
+          echo "BUILD_DIR=${GITHUB_WORKSPACE}/build" >> $GITHUB_ENV
+          echo "CT_RESULT_DIR=${GITHUB_WORKSPACE}/test" >> $GITHUB_ENV
+
       - name: Checkout repo
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           path: ${{ env.SOURCE_DIR }}
 
@@ -59,7 +62,7 @@ jobs:
           ctest --test-dir ${{ env.BUILD_DIR }} --output-junit ${{ env.CT_RESULT_DIR }}/results.xml ${{ env.CT_OPTS }} -R '\[${{ env.MODULE_DIR }}\]'
 
       - name: Upload test artifact
-        uses: actions/upload-artifact@v3
+        uses: actions/upload-artifact@v4
         if: failure()
         with:
           name: tests-${{ env.MODULE_DIR }}-artifact

diff --git a/.github/workflows/elastodynamics.yml b/.github/workflows/elastodynamics.yml
@@ -12,13 +12,9 @@ on:
   workflow_dispatch:
 
 env:
-
-  SOURCE_DIR: '/__w/arcanefem/arcanefem/src'
-  BUILD_DIR: '/__w/arcanefem/arcanefem/build'
   MODULE_DIR: 'elastodynamics'
 
   # CTest
-  CT_RESULT_DIR: '/__w/arcanefem/arcanefem/test'
   CT_OPTS: "--timeout 300 --output-on-failure"
 
   # MPI
@@ -31,11 +27,18 @@ jobs:
     name: 'Build and Test'
     runs-on: ubuntu-latest
     container:
-      image: ghcr.io/arcaneframework/arcane_ubuntu-2204:gcc-12_full_check_latest
+      image: ghcr.io/arcaneframework/arcane_ubuntu-2404:gcc-14_full_check_latest
 
     steps:
+      - name: Define environment paths
+        shell: bash
+        run: |
+          echo "SOURCE_DIR=${GITHUB_WORKSPACE}/src" >> $GITHUB_ENV
+          echo "BUILD_DIR=${GITHUB_WORKSPACE}/build" >> $GITHUB_ENV
+          echo "CT_RESULT_DIR=${GITHUB_WORKSPACE}/test" >> $GITHUB_ENV
+
       - name: Checkout repo
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           path: ${{ env.SOURCE_DIR }}
 
@@ -59,7 +62,7 @@ jobs:
           ctest --test-dir ${{ env.BUILD_DIR }} --output-junit ${{ env.CT_RESULT_DIR }}/results.xml ${{ env.CT_OPTS }} -R '\[${{ env.MODULE_DIR }}\]'
 
       - name: Upload test artifact
-        uses: actions/upload-artifact@v3
+        uses: actions/upload-artifact@v4
         if: failure()
         with:
           name: tests-${{ env.MODULE_DIR }}-artifact

diff --git a/.github/workflows/electrostatics.yml b/.github/workflows/electrostatics.yml
@@ -12,13 +12,9 @@ on:
   workflow_dispatch:
 
 env:
-
-  SOURCE_DIR: '/__w/arcanefem/arcanefem/src'
-  BUILD_DIR: '/__w/arcanefem/arcanefem/build'
   MODULE_DIR: 'electrostatics'
 
   # CTest
-  CT_RESULT_DIR: '/__w/arcanefem/arcanefem/test'
   CT_OPTS: "--timeout 300 --output-on-failure"
 
   # MPI
@@ -31,11 +27,18 @@ jobs:
     name: 'Build and Test'
     runs-on: ubuntu-latest
     container:
-      image: ghcr.io/arcaneframework/arcane_ubuntu-2204:gcc-12_full_check_latest
+      image: ghcr.io/arcaneframework/arcane_ubuntu-2404:gcc-14_full_check_latest
 
     steps:
+      - name: Define environment paths
+        shell: bash
+        run: |
+          echo "SOURCE_DIR=${GITHUB_WORKSPACE}/src" >> $GITHUB_ENV
+          echo "BUILD_DIR=${GITHUB_WORKSPACE}/build" >> $GITHUB_ENV
+          echo "CT_RESULT_DIR=${GITHUB_WORKSPACE}/test" >> $GITHUB_ENV
+
       - name: Checkout repo
-        uses: actions/checkout@v3
+        uses: actions/checkout@v4
         with:
           path: ${{ env.SOURCE_DIR }}
 
@@ -59,7 +62,7 @@ jobs:
           ctest --test-dir ${{ env.BUILD_DIR }} --output-junit ${{ env.CT_RESULT_DIR }}/results.xml ${{ env.CT_OPTS }} -R '\[${{ env.MODULE_DIR }}\]'
 
       - name: Upload test artifact
-        uses: actions/upload-artifact@v3
+        uses: actions/upload-artifact@v4
         if: failure()
         with:
           name: tests-${{ env.MODULE_DIR }}-artifact