Edits to base GRN, CCI core

aristoteleo · Mar 4, 2024 · be1ab6d · be1ab6d
1 parent d917a02
commit be1ab6d
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/spateo/tools/CCI_effects_modeling/MuSIC_downstream.py b/spateo/tools/CCI_effects_modeling/MuSIC_downstream.py
@@ -808,6 +808,7 @@ def plot_interaction_effect_3D(
         self.logger.info(f"{(target_interaction_coef > 0).sum()} {target}-expressing cells affected by {interaction}.")
         if n_neighbors_smooth > 0:
             from scipy.spatial import cKDTree
+
             tree = cKDTree(coords)
             distances, indices = tree.query(coords, k=n_neighbors_smooth + 1)
             smoothed_values = np.zeros(len(target_interaction_coef))