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Merge pull request #74 from joanvyc/app/siesta
App/siesta
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,90 @@ | ||
| import reframe as rfm | ||
| import reframe.utility.sanity as sn | ||
| import hackathon as hack | ||
| # | ||
| #@rfm.simple_test | ||
| #class SiestaTest(hack.HackathonBase): | ||
| # # Where to run the binaries 'aws:c6gn' on Arm or 'aws:c5n' on Intel | ||
| # test_name = parameter( ['si64_coop', 'h2o', 'n_chain', 'carbon_nanoscroll'] ) | ||
| # | ||
| # valid_systems = ['aws:c6gn'] | ||
| # | ||
| # # Logging Variables | ||
| # log_team_name = 'GarotesdePremia' | ||
| # log_app_name = 'SIESTA' | ||
| # | ||
| # | ||
| # executable = 'siesta' | ||
| # | ||
| # spec = parameter([ | ||
| # 'siesta@4.0.1 %gcc@10.3.0' # Siesta GCC | ||
| # ]) | ||
| # | ||
| # parallelism = parameter([ | ||
| # { 'nodes' : 1, 'mpi' : 4, 'omp' : 1}, | ||
| # ]) | ||
| # | ||
| # @run_after('init') | ||
| # def get_name(self): | ||
| # name=self.test_name | ||
| # self.log_test_name = 'Test {} input'.format(name) | ||
| # self.prerun_cmds = ['cp -r /home/gnuille/siesta_exec/siesta .', 'cd siesta/Tests/{}'.format(name), 'for spec in `cat {}.pseudos`; do ln ../Pseudos/$spec.psf . ; done'.format(name) ] | ||
| # self.executable_opts = ['<', '{}.fdf'.format(name)] | ||
| # self.logfile = 'test_{}.log'.format(name) | ||
| # self.keep_files = [self.logfile] | ||
| # | ||
| # @run_before('sanity') | ||
| # def set_sanity_patterns(self): | ||
| # self.sanity_patterns = sn.assert_found('Job completed', sn.print(self.stdout)) | ||
|
|
||
| @rfm.simple_test | ||
| class SiestaScalabilityTest(hack.HackathonBase): | ||
|
|
||
| #test_name = parameter( ['h2o_2', 'h2o_4', 'h2o_512'] ) | ||
| test_name = parameter( ['h2o_64'] ) | ||
|
|
||
| # Where to run the binaries 'aws:c6gn' on Arm or 'aws:c5n' on Intel | ||
| valid_systems = ['aws:c5n'] | ||
|
|
||
| # Logging Variables | ||
| log_team_name = 'GarotesdePremia' | ||
| log_app_name = 'SIESTA' | ||
|
|
||
|
|
||
| executable = 'siesta' | ||
|
|
||
| spec = parameter([ | ||
| 'siesta@4.0.1 %gcc@10.3.0 +metis' # Siesta GCC metis | ||
| ]) | ||
|
|
||
| parallelism = parameter([ | ||
| { 'nodes' : 1, 'mpi' : 8, 'omp' : 1}, | ||
| { 'nodes' : 1, 'mpi' : 16, 'omp' : 1}, | ||
| { 'nodes' : 1, 'mpi' : 32, 'omp' : 1}, | ||
| { 'nodes' : 1, 'mpi' : 64, 'omp' : 1}, | ||
| { 'nodes' : 2, 'mpi' : 128, 'omp' : 1}, | ||
| { 'nodes' : 4, 'mpi' : 256, 'omp' : 1}, | ||
| ]) | ||
|
|
||
| @run_after('init') | ||
| def get_name(self): | ||
| name=self.test_name | ||
| self.log_test_name = 'Scalability {} input'.format(name) | ||
| self.prerun_cmds = ['cp -r /scratch/home/jvinyals/siesta .', 'cd siesta/Tests/{}'.format(name), 'for spec in `cat {}.pseudos`; do ln ../Pseudos/$spec.psf . ; done'.format(name) ] | ||
| self.executable_opts = ['<', '{}.fdf'.format(name)] | ||
| self.logfile = 'test_{}.log'.format(name) | ||
| self.keep_files = [self.logfile] | ||
|
|
||
| @run_before('sanity') | ||
| def set_sanity_patterns(self): | ||
| self.sanity_patterns = sn.assert_found('Job completed', sn.print(self.stdout)) | ||
|
|
||
| @run_before('run') | ||
| def set_timmer(self): | ||
| self.job.launcher.options = ['/usr/bin/time -f "Elapsed for reframe: %e"'] | ||
|
|
||
| @run_before('performance') | ||
| def set_perf_pattern(self): | ||
| self.perf_patterns = { | ||
| 'Run Time': sn.max(sn.extractall(r'Elapsed for reframe:\s+(\S+).*', self.stderr, 1, float)) | ||
| } |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,90 @@ | ||
| import reframe as rfm | ||
| import reframe.utility.sanity as sn | ||
| import hackathon as hack | ||
| # | ||
| #@rfm.simple_test | ||
| #class SiestaTest(hack.HackathonBase): | ||
| # # Where to run the binaries 'aws:c6gn' on Arm or 'aws:c5n' on Intel | ||
| # test_name = parameter( ['si64_coop', 'h2o', 'n_chain', 'carbon_nanoscroll'] ) | ||
| # | ||
| # valid_systems = ['aws:c6gn'] | ||
| # | ||
| # # Logging Variables | ||
| # log_team_name = 'GarotesdePremia' | ||
| # log_app_name = 'SIESTA' | ||
| # | ||
| # | ||
| # executable = 'siesta' | ||
| # | ||
| # spec = parameter([ | ||
| # 'siesta@4.0.1 %gcc@10.3.0' # Siesta GCC | ||
| # ]) | ||
| # | ||
| # parallelism = parameter([ | ||
| # { 'nodes' : 1, 'mpi' : 4, 'omp' : 1}, | ||
| # ]) | ||
| # | ||
| # @run_after('init') | ||
| # def get_name(self): | ||
| # name=self.test_name | ||
| # self.log_test_name = 'Test {} input'.format(name) | ||
| # self.prerun_cmds = ['cp -r /home/gnuille/siesta_exec/siesta .', 'cd siesta/Tests/{}'.format(name), 'for spec in `cat {}.pseudos`; do ln ../Pseudos/$spec.psf . ; done'.format(name) ] | ||
| # self.executable_opts = ['<', '{}.fdf'.format(name)] | ||
| # self.logfile = 'test_{}.log'.format(name) | ||
| # self.keep_files = [self.logfile] | ||
| # | ||
| # @run_before('sanity') | ||
| # def set_sanity_patterns(self): | ||
| # self.sanity_patterns = sn.assert_found('Job completed', sn.print(self.stdout)) | ||
|
|
||
| @rfm.simple_test | ||
| class SiestaScalabilityTest(hack.HackathonBase): | ||
|
|
||
| #test_name = parameter( ['h2o_2', 'h2o_4', 'h2o_512'] ) | ||
| test_name = parameter( ['h2o_64'] ) | ||
|
|
||
| # Where to run the binaries 'aws:c6gn' on Arm or 'aws:c5n' on Intel | ||
| valid_systems = ['aws:c6n', 'aws:c6gn'] | ||
|
|
||
| # Logging Variables | ||
| log_team_name = 'GarotesdePremia' | ||
| log_app_name = 'SIESTA' | ||
|
|
||
|
|
||
| executable = 'siesta' | ||
|
|
||
| spec = parameter([ | ||
| 'siesta@4.0.1 %gcc@10.3.0 +metis' # Siesta GCC metis | ||
| ]) | ||
|
|
||
| parallelism = parameter([ | ||
| { 'nodes' : 1, 'mpi' : 8, 'omp' : 1}, | ||
| { 'nodes' : 1, 'mpi' : 16, 'omp' : 1}, | ||
| { 'nodes' : 1, 'mpi' : 32, 'omp' : 1}, | ||
| { 'nodes' : 1, 'mpi' : 64, 'omp' : 1}, | ||
| { 'nodes' : 2, 'mpi' : 128, 'omp' : 1}, | ||
| { 'nodes' : 4, 'mpi' : 256, 'omp' : 1}, | ||
| ]) | ||
|
|
||
| @run_after('init') | ||
| def get_name(self): | ||
| name=self.test_name | ||
| self.log_test_name = 'Scalability {} input'.format(name) | ||
| self.prerun_cmds = ['cp -r /scratch/home/jvinyals/siesta .', 'cd siesta/Tests/{}'.format(name), 'for spec in `cat {}.pseudos`; do ln ../Pseudos/$spec.psf . ; done'.format(name) ] | ||
| self.executable_opts = ['<', '{}.fdf'.format(name)] | ||
| self.logfile = 'test_{}.log'.format(name) | ||
| self.keep_files = [self.logfile] | ||
|
|
||
| @run_before('sanity') | ||
| def set_sanity_patterns(self): | ||
| self.sanity_patterns = sn.assert_found('Job completed', sn.print(self.stdout)) | ||
|
|
||
| @run_before('run') | ||
| def set_timmer(self): | ||
| self.job.launcher.options = ['/usr/bin/time -f "Elapsed for reframe: %e"'] | ||
|
|
||
| @run_before('performance') | ||
| def set_perf_pattern(self): | ||
| self.perf_patterns = { | ||
| 'Run Time': sn.max(sn.extractall(r'Elapsed for reframe:\s+(\S+).*', self.stderr, 1, float)) | ||
| } |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,90 @@ | ||
| import reframe as rfm | ||
| import reframe.utility.sanity as sn | ||
| import hackathon as hack | ||
| # | ||
| #@rfm.simple_test | ||
| #class SiestaTest(hack.HackathonBase): | ||
| # # Where to run the binaries 'aws:c6gn' on Arm or 'aws:c5n' on Intel | ||
| # test_name = parameter( ['si64_coop', 'h2o', 'n_chain', 'carbon_nanoscroll'] ) | ||
| # | ||
| # valid_systems = ['aws:c6gn'] | ||
| # | ||
| # # Logging Variables | ||
| # log_team_name = 'GarotesdePremia' | ||
| # log_app_name = 'SIESTA' | ||
| # | ||
| # | ||
| # executable = 'siesta' | ||
| # | ||
| # spec = parameter([ | ||
| # 'siesta@4.0.1 %gcc@10.3.0' # Siesta GCC | ||
| # ]) | ||
| # | ||
| # parallelism = parameter([ | ||
| # { 'nodes' : 1, 'mpi' : 4, 'omp' : 1}, | ||
| # ]) | ||
| # | ||
| # @run_after('init') | ||
| # def get_name(self): | ||
| # name=self.test_name | ||
| # self.log_test_name = 'Test {} input'.format(name) | ||
| # self.prerun_cmds = ['cp -r /home/gnuille/siesta_exec/siesta .', 'cd siesta/Tests/{}'.format(name), 'for spec in `cat {}.pseudos`; do ln ../Pseudos/$spec.psf . ; done'.format(name) ] | ||
| # self.executable_opts = ['<', '{}.fdf'.format(name)] | ||
| # self.logfile = 'test_{}.log'.format(name) | ||
| # self.keep_files = [self.logfile] | ||
| # | ||
| # @run_before('sanity') | ||
| # def set_sanity_patterns(self): | ||
| # self.sanity_patterns = sn.assert_found('Job completed', sn.print(self.stdout)) | ||
|
|
||
| @rfm.simple_test | ||
| class SiestaScalabilityTest(hack.HackathonBase): | ||
|
|
||
| #test_name = parameter( ['h2o_2', 'h2o_4', 'h2o_512'] ) | ||
| test_name = parameter( ['h2o_64'] ) | ||
|
|
||
| # Where to run the binaries 'aws:c6gn' on Arm or 'aws:c5n' on Intel | ||
| valid_systems = ['aws:c6gn'] | ||
|
|
||
| # Logging Variables | ||
| log_team_name = 'GarotesdePremia' | ||
| log_app_name = 'SIESTA' | ||
|
|
||
|
|
||
| executable = 'siesta' | ||
|
|
||
| spec = parameter([ | ||
| 'siesta@4.0.1 %gcc@10.3.0 +metis' # Siesta GCC metis | ||
| ]) | ||
|
|
||
| parallelism = parameter([ | ||
| { 'nodes' : 1, 'mpi' : 8, 'omp' : 1}, | ||
| { 'nodes' : 1, 'mpi' : 16, 'omp' : 1}, | ||
| { 'nodes' : 1, 'mpi' : 32, 'omp' : 1}, | ||
| { 'nodes' : 1, 'mpi' : 64, 'omp' : 1}, | ||
| { 'nodes' : 2, 'mpi' : 128, 'omp' : 1}, | ||
| { 'nodes' : 4, 'mpi' : 256, 'omp' : 1}, | ||
| ]) | ||
|
|
||
| @run_after('init') | ||
| def get_name(self): | ||
| name=self.test_name | ||
| self.log_test_name = 'Scalability {} input'.format(name) | ||
| self.prerun_cmds = ['cp -r /scratch/home/jvinyals/siesta .', 'cd siesta/Tests/{}'.format(name), 'for spec in `cat {}.pseudos`; do ln ../Pseudos/$spec.psf . ; done'.format(name) ] | ||
| self.executable_opts = ['<', '{}.fdf'.format(name)] | ||
| self.logfile = 'test_{}.log'.format(name) | ||
| self.keep_files = [self.logfile] | ||
|
|
||
| @run_before('sanity') | ||
| def set_sanity_patterns(self): | ||
| self.sanity_patterns = sn.assert_found('Job completed', sn.print(self.stdout)) | ||
|
|
||
| @run_before('run') | ||
| def set_timmer(self): | ||
| self.job.launcher.options = ['/usr/bin/time -f "Elapsed for reframe: %e"'] | ||
|
|
||
| @run_before('performance') | ||
| def set_perf_pattern(self): | ||
| self.perf_patterns = { | ||
| 'Run Time': sn.max(sn.extractall(r'Elapsed for reframe:\s+(\S+).*', self.stderr, 1, float)) | ||
| } |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,94 @@ | ||
| import reframe as rfm | ||
| import reframe.utility.sanity as sn | ||
| import hackathon as hack | ||
| # | ||
| #@rfm.simple_test | ||
| #class SiestaTest(hack.HackathonBase): | ||
| # # Where to run the binaries 'aws:c6gn' on Arm or 'aws:c5n' on Intel | ||
| # test_name = parameter( ['si64_coop', 'h2o', 'n_chain', 'carbon_nanoscroll'] ) | ||
| # | ||
| # valid_systems = ['aws:c6gn'] | ||
| # | ||
| # # Logging Variables | ||
| # log_team_name = 'GarotesdePremia' | ||
| # log_app_name = 'SIESTA' | ||
| # | ||
| # | ||
| # executable = 'siesta' | ||
| # | ||
| # spec = parameter([ | ||
| # 'siesta@4.0.1 %gcc@10.3.0' # Siesta GCC | ||
| # ]) | ||
| # | ||
| # parallelism = parameter([ | ||
| # { 'nodes' : 1, 'mpi' : 4, 'omp' : 1}, | ||
| # ]) | ||
| # | ||
| # @run_after('init') | ||
| # def get_name(self): | ||
| # name=self.test_name | ||
| # self.log_test_name = 'Test {} input'.format(name) | ||
| # self.prerun_cmds = ['cp -r /home/gnuille/siesta_exec/siesta .', 'cd siesta/Tests/{}'.format(name), 'for spec in `cat {}.pseudos`; do ln ../Pseudos/$spec.psf . ; done'.format(name) ] | ||
| # self.executable_opts = ['<', '{}.fdf'.format(name)] | ||
| # self.logfile = 'test_{}.log'.format(name) | ||
| # self.keep_files = [self.logfile] | ||
| # | ||
| # @run_before('sanity') | ||
| # def set_sanity_patterns(self): | ||
| # self.sanity_patterns = sn.assert_found('Job completed', sn.print(self.stdout)) | ||
|
|
||
| @rfm.simple_test | ||
| class SiestaScalabilityTest(hack.HackathonBase): | ||
|
|
||
| #test_name = parameter( ['h2o_2', 'h2o_4', 'h2o_512'] ) | ||
| test_name = parameter( ['h2o_64'] ) | ||
|
|
||
| # Where to run the binaries 'aws:c6gn' on Arm or 'aws:c5n' on Intel | ||
| valid_systems = ['aws:c6gn'] | ||
|
|
||
| # Logging Variables | ||
| log_team_name = 'GarotesdePremia' | ||
| log_app_name = 'SIESTA' | ||
|
|
||
|
|
||
| executable = 'siesta' | ||
|
|
||
| spec = parameter([ | ||
| 'siesta@4.0.1 %gcc@10.3.0 +metis' # Siesta GCC metis | ||
| ]) | ||
|
|
||
| parallelism = parameter([ | ||
| { 'nodes' : 1, 'mpi' : 1, 'omp' : 1}, | ||
| { 'nodes' : 1, 'mpi' : 2, 'omp' : 1}, | ||
| { 'nodes' : 1, 'mpi' : 4, 'omp' : 1}, | ||
| { 'nodes' : 1, 'mpi' : 8, 'omp' : 1}, | ||
| { 'nodes' : 1, 'mpi' : 16, 'omp' : 1}, | ||
| { 'nodes' : 1, 'mpi' : 32, 'omp' : 1}, | ||
| { 'nodes' : 1, 'mpi' : 64, 'omp' : 1}, | ||
| #{ 'nodes' : 2, 'mpi' : 128, 'omp' : 1}, | ||
| #{ 'nodes' : 4, 'mpi' : 256, 'omp' : 1}, | ||
| #{ 'nodes' : 8, 'mpi' : 512, 'omp' : 1}, | ||
| ]) | ||
|
|
||
| @run_after('init') | ||
| def get_name(self): | ||
| name=self.test_name | ||
| self.log_test_name = 'Scalability {} input'.format(name) | ||
| self.prerun_cmds = ['cp -r /scratch/home/jvinyals/siesta .', 'cd siesta/Tests/{}'.format(name), 'for spec in `cat {}.pseudos`; do ln ../Pseudos/$spec.psf . ; done'.format(name) ] | ||
| self.executable_opts = ['<', '{}.fdf'.format(name)] | ||
| self.logfile = 'test_{}.log'.format(name) | ||
| self.keep_files = [self.logfile] | ||
|
|
||
| @run_before('sanity') | ||
| def set_sanity_patterns(self): | ||
| self.sanity_patterns = sn.assert_found('Job completed', sn.print(self.stdout)) | ||
|
|
||
| @run_before('run') | ||
| def set_timmer(self): | ||
| self.job.launcher.options = ['/usr/bin/time -f "Elapsed for reframe: %e"'] | ||
|
|
||
| @run_before('performance') | ||
| def set_perf_pattern(self): | ||
| self.perf_patterns = { | ||
| 'Run Time': sn.max(sn.extractall(r'Elapsed for reframe:\s+(\S+).*', self.stderr, 1, float)) | ||
| } |
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