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rewrote the subset selector for sgrid, added test based on example notebook #61

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merged 9 commits into from
Sep 13, 2024
Merged

rewrote the subset selector for sgrid, added test based on example notebook #61

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b52b12e
rewrote the subset selector for sgrid, added test based on example no…
jay-hennen Sep 7, 2024
36df925
added arakawa_c_test_grid.nc from gridded package
jay-hennen Sep 9, 2024
1e6d620
added test utils, new test stub
jay-hennen Sep 10, 2024
06b3843
fixed test grid nc, added 1x padding for psi grid subsets
jay-hennen Sep 10, 2024
02fc924
delete redundant utils
jay-hennen Sep 13, 2024
e8692f8
moved subset parse back into sgrid
jay-hennen Sep 13, 2024
d17517a
check standard name for lon/lat
jay-hennen Sep 13, 2024
338a1f7
need to look up var in ds
jay-hennen Sep 13, 2024
83ad4af
linted
jay-hennen Sep 13, 2024
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2 changes: 0 additions & 2 deletions docs/examples/gfs_opendap.ipynb
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Original file line number Diff line number Diff line change
Expand Up @@ -17587,10 +17587,8 @@
"source": [
"import cf_xarray # noqa\n",
"import datetime\n",
"import numpy as np\n",
"import xarray as xr\n",
"\n",
"import xarray_subset_grid as xsg\n",
"\n",
"\n",
"current_date = datetime.datetime.now().strftime(\"%Y%m%d\")\n",
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2 changes: 0 additions & 2 deletions docs/examples/nam_opendap.ipynb
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Expand Up @@ -11672,10 +11672,8 @@
"source": [
"import cf_xarray # noqa\n",
"import datetime\n",
"import numpy as np\n",
"import xarray as xr\n",
"\n",
"import xarray_subset_grid as xsg\n",
"\n",
"\n",
"current_date = datetime.datetime.now().strftime(\"%Y%m%d\")\n",
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1 change: 0 additions & 1 deletion docs/examples/regular_grid_2d.ipynb
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Expand Up @@ -1327,7 +1327,6 @@
"import numpy as np\n",
"import xarray as xr\n",
"\n",
"import xarray_subset_grid\n",
"\n",
"# Open the dataset from NODD s3 bucket directly\n",
"fs = fsspec.filesystem(\"s3\", anon=True)\n",
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5 changes: 3 additions & 2 deletions docs/examples/roms-compare.ipynb
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Expand Up @@ -5293,7 +5293,6 @@
}
],
"source": [
"import cf_xarray\n",
"import fsspec\n",
"import numpy as np\n",
"import xarray as xr\n",
Expand Down Expand Up @@ -8601,7 +8600,9 @@
}
],
"source": [
"ds_subset_control = xr.open_dataset('./wcofs-subset-control.nc', chunks={}, backend_kwargs={'decode_times': False})\n",
"ds_subset_control = xr.open_dataset('./wcofs-subset-control.nc',\n",
" chunks={},\n",
" backend_kwargs={'decode_times': False})\n",
"ds_subset_control"
]
},
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1 change: 0 additions & 1 deletion docs/examples/roms.ipynb
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Expand Up @@ -5235,7 +5235,6 @@
}
],
"source": [
"import cf_xarray\n",
"import fsspec\n",
"import numpy as np\n",
"import xarray as xr\n",
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1 change: 0 additions & 1 deletion docs/examples/roms_3d.ipynb
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Expand Up @@ -4150,7 +4150,6 @@
}
],
"source": [
"import cf_xarray\n",
"import fsspec\n",
"import numpy as np\n",
"import xarray as xr\n",
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1 change: 0 additions & 1 deletion docs/examples/rtofs.ipynb
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Expand Up @@ -1285,7 +1285,6 @@
"import cf_xarray # noqa\n",
"import datetime\n",
"import fsspec\n",
"import numpy as np\n",
"import xarray as xr\n",
"\n",
"import xarray_subset_grid.accessor # noqa: F401\n",
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4 changes: 3 additions & 1 deletion docs/examples/sscofs.ipynb
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Expand Up @@ -3883,7 +3883,9 @@
}
],
"source": [
"ds = xarray_subset_grid.grids.ugrid.assign_ugrid_topology(ds, face_node_connectivity='nv', face_face_connectivity='nbe')\n",
"ds = xarray_subset_grid.grids.ugrid.assign_ugrid_topology(ds,\n",
" face_node_connectivity='nv',\n",
" face_face_connectivity='nbe')\n",
"ds.cf['mesh_topology']"
]
},
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