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Makefile_header.mk
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#EOC
#------------------------------------------------------------------------------
# Harvard University Atmospheric Chemistry Modeling Group !
#------------------------------------------------------------------------------
#BOP
#
# !IROUTINE: Makefile_header.mk
#
# !DESCRIPTION: This sub-makefile defines the variables which specify
# compilation options for the different supported compiler/platform
# combinations. Also, the default makefile compilation rules are specified
# here.
#\\
#\\
# !REMARKS:
# To build the programs, call "make" with the following syntax:
# .
# make -jN TARGET REQUIRED-FLAGS [ OPTIONAL-FLAGS ]
#
# To display a complete list of options, type "make help".
# .
# The following variables are exported to the main-level Makefile:
# .
# Variable Description
# -------- -----------
# CC Contains the default C compilation commands (for PGI only)
# F90 Contains the Fortran compilation commands
# FREEFORM Contains the command to force F90 "free format" compilation
# LD Contains the command to link to libraries & make executable
# LINK Contains the commands to link to GEOS-Chem built libraries
# R8 Contains the command to force REAL -> REAL*8
# SHELL Contains the default Unix shell to use when building code
# NCL Contains the default netCDF library link commands
# .
# FFLAGS is a local variable that is not returned to the "outside world",
# but is only used locally. COMPILER, HDF5, and OMP are all input via the
# command line or via environment variables.
# .
# NOTE: We now use SHELL :=/bin/bash as the default Unix shell. This allows
# us to extend the Makefile ifeq statements so that we can test for more than
# one string. The following example is used to ensure that the met field name
# selected by the user is case-insensitive:
#
# # %%%%% GEOS-5 %%%%%
# REGEXP :=((^[Gg][Ee][Oo][Ss])?5|.5)
# ifeq ($(shell [[ "$(MET)" =~ $(REGEXP) ]] && echo true),true)
# USER_DEFS += -DGEOS_5
# endif
# .
# The [[ ]] in bash is an evaluation. The above ifeq statement uses regular
# expressions to test if the MET variable matches the string "GEOS" (case-
# insensitive) and either "5" or "any character and then a 5". This will
# return true (via the "echo true" statement) for combinations like "GEOS-5",
# "geos5", "Geos-5", "GeOs.5", etc. This is a robust way of evaluating
# the user's input, and will make errors less likely.
#
# !REVISION HISTORY:
# 16 Sep 2009 - R. Yantosca - Initial version
# 22 Sep 2009 - R. Yantosca - Bug fix, added -I$(HDR) to F90 compilation lines
# 24 Sep 2009 - R. Yantosca - added NONUMA option for PGI compiler
# 07 Oct 2009 - R. Yantosca - Replaced .SUFFIXES section w/ pattern rules
# 19 Nov 2009 - R. Yantosca - Now use OMP variable to determine whether to
# turn on OpenMP parallelization options
# 23 Nov 2009 - R. Yantosca - Now use -module $(MOD) instead of -I$(MOD) to
# specify the directory for *.mod files on both
# IFORT and PGI compilers.
# 23 Nov 2009 - R. Yantosca - Now use -moddir=$(MOD) and -M$(MOD) instead of
# -I$(MOD) to specify the directory for *.mod
# files on the SunStudio compiler.
# 23 Nov 2009 - R. Yantosca - Change DEBUG to allow for new version of
# Totalview which doesn't choke when debugging
# parallel code (Totalview 8.6.1-1)
# 02 Dec 2009 - R. Yantosca - Added SUN32 switch for building 32-bit
# executbable on the SunStudio compiler
# 11 Dec 2009 - R. Yantosca - Now define SHELL here and export to other
# Makefiles, so as to have a single place where
# the Unix shell name is defined.
# 21 Dec 2009 - R. Yantosca - Add H5I and H5L variables to specify the
# HDF5 library and include paths. Also set
# the default to not link to the HDF5 libraries.
# 21 Dec 2009 - R. Yantosca - Now pass LINK back to the outside world, so
# that the Makefile that builds the executable
# can reference it.
# 19 Jan 2010 - R. Yantosca - Minor fix, add -m64 if SUN32 is not defined.
# 25 Jan 2010 - R. Yantosca - Now add -DTOMAS to FFLAGS if necessary
# 28 Jan 2010 - C. Carouge - Add -lIsoropia to LINK, for ISORROPIA II
# 16 Feb 2011 - R. Yantosca - Now add -DAPM to FFLAGS if necessary
# 25 Aug 2011 - R. Yantosca - Add "-fp-model source" to FFLAGS for IFORT
# compiler. This will prevent aggressive
# optimizations from changing numerical results.
# 25 Aug 2011 - R. Yantosca - Add -CU (check for uninit'd variables) to
# FFLAGS when using IFORT w/ the DEBUG option.
# 26 Aug 2011 - R. Yantosca - Allow for deactivation of the "-fp-model source"
# option by using the PRECISE=no env variable
# 24 Jan 2012 - R. Yantosca - If NETCDF=yes, GEOS-Chem will link and include
# to the netCDF dir paths that are specified
# 24 Jan 2012 - R. Yantosca - Now use := for makefile assignment statements
# 10 Feb 2012 - R. Yantosca - When compiling with NETCDF=yes or HDF5=yes,
# we must also add the flags -mcmodel=medium
# -i-dynamic to FFLAGS in order to avoid memory
# errors (for IFORT only)
# 10 Feb 2012 - R. Yantosca - Remove -CU from the DEBUG option (IFORT only)
# 19 Mar 2012 - R. Yantosca - Add optional NO_ISO switch, which will turn off
# the ISORROPIA ATE package for testing
# 05 Apr 2012 - R. Yantosca - Now assume netCDF is always used
# 05 Apr 2012 - R. Yantosca - Change BL_INC_NETCDF to INC_NETCDF
# 05 Apr 2012 - R. Yantosca - Change BL_INC_HDF5 to INC_HDF5
# 05 Apr 2012 - R. Yantosca - Change BL_LIB_NETCDF to LIB_NETCDF
# 05 Apr 2012 - R. Yantosca - Change BL_LIB_HDF5 to LIB_HDF5
# 30 Apr 2012 - R. Yantosca - Add NETCDF3=[yes|no] makefile option
# 30 Apr 2012 - R. Yantosca - Use separate netCDF link and include paths
# for netCDF3 and for netCDF4
# 30 Apr 2012 - R. Yantosca - Also add -mcmodel=medium flag for PGI compiler
# 09 May 2012 - R. Yantosca - Now try to get the proper linking sequence
# for netCDF etc w/ nf-config and nc-config.
# 11 May 2012 - R. Yantosca - Now export NCL (netCDF linking sequence)
# 07 Sep 2012 - R. Yantosca - Now add OPT variable to set global opt levels
# 07 Sep 2012 - R. Yantosca - Also set TRACEBACK for PGI compiler
# 17 Apr 2013 - R. Yantosca - Add switch to set -DKPP_SOLVE_ALWAYS, which
# will force KPP to get past nonconvergences
# 25 Feb 2013 - S. Farina - Add flag for TOMAS40
# 22 Apr 2013 - R. Yantosca - TOMAS40=yes option now sets -DTOMAS -DTOMAS40
# 28 Apr 2013 - S. Farina - Add flags for TOMAS15 and TOMAS12
# 13 Aug 2013 - R. Yantosca - Removed "define.h"; now set all GEOS-Chem
# user options via the Make command
# 14 Aug 2013 - R. Yantosca - Now use regular expressions to test the
# validity of command-line inputs
# 21 Aug 2013 - R. Yantosca - Improved error checking for command line inputs
# 26 Aug 2013 - R. Yantosca - Add -debug all as an IFORT debugging option
# 16 Sep 2013 - R. Yantosca - Now set GIGC Cpp switches first. This allows
# us to skip the GRID setting if we are using
# EXTERNAL_GRID=yes or EXTERNAL_FORCING=yes.
# 18 Sep 2013 - M. Long - Add edits for HPC Grid-Indpendent GEOS-Chem
# 26 Sep 2013 - R. Yantosca - MET=geosfp now sets Cpp switch w/ -DGEOS_FP
# 07 Nov 2013 - R. Yantosca - NEST=se to now sets CPP switch w/ -DNESTED_SE
# 08 Nov 2013 - R. Yantosca - Add FPEX flag to avoid conflicting with the
# ESMF/MAPL environment variable FPE
#EOP
#------------------------------------------------------------------------------
#BOC
#==============================================================================
# Default values for variables
#==============================================================================
# Set default shell to bash, for use with the Makefile conditionals
SHELL :=/bin/bash
# Error message for bad COMPILER input
ERR_CMPLR :="Select a compiler: COMPILER=ifort, COMPILER=pgi"
# Error message for bad MET input
ERR_MET :="Select a met field: MET=gcap, MET=geos4, MET=geos5, MET=merra, MET=geos-fp)"
# Error message for bad GRID input
ERR_GRID :="Select a horizontal grid: GRID=4x5. GRID=2x25, GRID=05x0666, GRID=025x03125"
# Error message for bad NEST input
ERR_NEST :="Select a nested grid: NEST=ch, NEST=eu, NEST=na"
# Library include path
NCI := -I$(GC_INCLUDE)
# Library link path: first try to get the list of proper linking flags
# for this build of netCDF with nf-config and nc-config.
NCL := $(shell $(GC_BIN)/nf-config --flibs)
NCL += $(shell $(GC_BIN)/nc-config --libs)
NCL := $(filter -l%,$(NCL))
#%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
#%%%% NOTE TO GEOS-CHEM USERS: If you do not have netCDF-4.2 installed
#%%%% Then you can add/modify the linking sequence here. (This sequence
#%%%% is a guess, but is probably good enough for other netCDF builds.)
ifeq ($(NCL),)
NCL :=-lnetcdf -lhdf5_hl -lhdf5 -lz
endif
#%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
# Prepend the library directory path to the linking sequence
NCL :=-L$(GC_LIB) $(NCL)
# Command to link to the various library files (-lHeaders should be last!)
LINK :=-L$(LIB) -lKpp -lIsoropia -lGeosUtil -lHeaders
LINK :=$(LINK) -lNcUtils $(NCL)
# Commands to link to libraries, for GTMM code (-lHeaders should be last!)
LHG :=-L$(LIB) -lKpp -lIsoropia -lHg -lGeosUtil -lHeaders
LHG :=$(LINK) -lNcUtils $(NCL)
#==============================================================================
# Set C-preprocessor switches representing user options. These are not
# specific to any compiler, but are general options for the simulation.
#
# NOTE: To make the user input more robust, we use regular expression syntax
# to match characters in the various Makefile variables. See this web page
# for more info: http://www.tldp.org/LDP/abs/html/x17046.html
#==============================================================================
#------------------------------------------------------------------------------
# Compiler settings
#------------------------------------------------------------------------------
# %%%%% OpenMP parallelization default) %%%%%
ifndef OMP
OMP :=yes
endif
ifeq ($(shell [[ "$(MAKECMDGOALS)" =~ "hpc" ]] && echo true),true)
OMP := no
endif
# %%%%% IFORT compiler (default) %%%%%
ifndef COMPILER
COMPILER :=ifort
endif
REGEXP :=(^[Ii][Ff][Oo][Rr][Tt])
ifeq ($(shell [[ "$(COMPILER)" =~ $(REGEXP) ]] && echo true),true)
USER_DEFS += -DLINUX_IFORT
endif
# %%%%% PG I compiler %%%%%
REGEXP :=(^[Pp][Gg][Ii])
ifeq ($(shell [[ "$(COMPILER)" =~ $(REGEXP) ]] && echo true),true)
USER_DEFS += -DLINUX_PGI
endif
# %%%%% ERROR CHECK! Make sure our COMPILER selection is valid! %%%%%
REGEXP :=((-DLINUX_)?IFORT|PGI)
ifneq ($(shell [[ "$(USER_DEFS)" =~ $(REGEXP) ]] && echo true),true)
$(error $(ERR_CMPLR))
endif
#------------------------------------------------------------------------------
# Grid-Independent GEOS-Chem settings
#------------------------------------------------------------------------------
# %%%%% DEVEL %%%%%
REGEXP :=(^[Yy]|^[Yy][Ee][Ss])
ifeq ($(shell [[ "$(DEVEL)" =~ $(REGEXP) ]] && echo true),true)
USER_DEFS += -DDEVEL
endif
# %%%%% ESMF %%%%%
REGEXP := (^[Yy]|^[Yy][Ee][Ss])
ifeq ($(shell [[ "$(ESMF)" =~ $(REGEXP) ]] && echo true),true)
USER_DEFS += -DESMF_
NO_GRID_NEEDED :=1
endif
# %%%%% EXTERNAL_GRID %%%%%
REGEXP := (^[Yy]|^[Yy][Ee][Ss])
ifeq ($(shell [[ "$(EXTERNAL_GRID)" =~ $(REGEXP) ]] && echo true),true)
USER_DEFS += -DEXTERNAL_GRID
NO_GRID_NEEDED :=1
endif
# %%%%% EXTERNAL_FORCING %%%%%
REGEXP := (^[Yy]|^[Yy][Ee][Ss])
ifeq ($(shell [[ "$(EXTERNAL_FORCING)" =~ $(REGEXP) ]] && echo true),true)
USER_DEFS += -DEXTERNAL_FORCING
NO_GRID_NEEDED :=1
endif
#------------------------------------------------------------------------------
# Met field settings
#------------------------------------------------------------------------------
# If the user has omitted MET, then throw an error UNLESS we are trying
# to compile with "clean", "distclean", "realclean", "doc", "help",
# "ncdfcheck", or "libnc". These targets don't depend on the value of MET.
ifndef MET
REGEXP :=($clean|^doc|^help|^libnc|^ncdfcheck)
ifeq ($(shell [[ "$(MAKECMDGOALS)" =~ $(REGEXP) ]] && echo true),true)
NO_MET_NEEDED :=1
else
$(error $(ERR_MET))
endif
endif
# We can skip the following checks for targets that don't require MET
ifndef NO_MET_NEEDED
# %%%%% GCAP %%%%%
REGEXP :=(^[Gg][Cc][Aa][Pp])
ifeq ($(shell [[ "$(MET)" =~ $(REGEXP) ]] && echo true),true)
USER_DEFS += -DGCAP
endif
# %%%%% GEOS-4 %%%%%
REGEXP :=((^[Gg][Ee][Oo][Ss])?4|.4)
ifeq ($(shell [[ "$(MET)" =~ $(REGEXP) ]] && echo true),true)
USER_DEFS += -DGEOS_4
endif
# %%%%% GEOS-5 %%%%%
REGEXP :=((^[Gg][Ee][Oo][Ss])?5|.5)
ifeq ($(shell [[ "$(MET)" =~ $(REGEXP) ]] && echo true),true)
USER_DEFS += -DGEOS_5
endif
# %%%%% MERRA %%%%%
REGEXP :=(^[Mm][Ee][Rr][Rr][Aa])
ifeq ($(shell [[ "$(MET)" =~ $(REGEXP) ]] && echo true),true)
USER_DEFS += -DMERRA
endif
# %%%%% GEOS-FP %%%%%
REGEXP :=(^[Gg][Ee][Oo][Ss][Ff][Pp])|(^[Gg][Ee][Oo][Ss].[Ff][Pp])
ifeq ($(shell [[ "$(MET)" =~ $(REGEXP) ]] && echo true),true)
USER_DEFS += -DGEOS_FP
endif
# %%%%% REDUCED VERTICAL GRID (default, unless specified otherwise) %%%%
ifndef NO_REDUCED
USER_DEFS += -DGRIDREDUCED
else
REGEXP :=(^[Yy]|^[Yy][Ee][Ss])
ifeq ($(shell [[ "$(NO_REDUCED)" =~ $(REGEXP) ]] && echo true),true)
endif
endif
# %%%%% ERROR CHECK! Make sure our MET selection is valid! %%%%%
REGEXP :=(\-DGCAP|\-DGEOS_4|\-DGEOS_5|\-DMERRA|\-DGEOS_FP)
ifneq ($(shell [[ "$(USER_DEFS)" =~ $(REGEXP) ]] && echo true),true)
$(error $(ERR_MET))
endif
endif # NO_MET_NEEDED
#------------------------------------------------------------------------------
# Horizontal grid settings
#------------------------------------------------------------------------------
# We can skip the following checks for targets that don't require GRID
# If the user has omitted GRID, then throw an error UNLESS we are trying
# to compile with "clean", "distclean", "realclean", "doc", "help",
# "ncdfcheck", or "libnc". These targets don't depend on the value of GRID.
ifndef NO_GRID_NEEDED
ifndef GRID
REGEXP :=($clean|^doc|^help|^libnc|^ncdfcheck)
ifeq ($(shell [[ $(MAKECMDGOALS) =~ $(REGEXP) ]] && echo true),true)
NO_GRID_NEEDED :=1
else
$(error $(ERR_GRID))
endif
endif
endif
# We can skip the following checks for targets that don't require GRID
ifndef NO_GRID_NEEDED
# %%%%% 4 x 5 %%%%%
REGEXP :=(^4.5|^4\.0.5\.0)
ifeq ($(shell [[ "$(GRID)" =~ $(REGEXP) ]] && echo true),true)
USER_DEFS += -DGRID4x5
endif
# %%%%% 2 x 2.5 %%%%%
REGEXP :=(^2.25|^2.2\.5|^2\.0.2\.5)
ifeq ($(shell [[ "$(GRID)" =~ $(REGEXP) ]] && echo true),true)
USER_DEFS += -DGRID2x25
endif
# %%%%% 1 x 1.25 %%%%%
REGEXP :=(^1.125|^1.1\.25|^1\.0.1\.25)
ifeq ($(shell [[ "$(GRID)" =~ $(REGEXP) ]] && echo true),true)
USER_DEFS += -DGRID1x125
endif
# %%%%% 0.5 x 0.666 %%%%%
REGEXP :=(^05.066.|^0\.5.0\.066.)
ifeq ($(shell [[ "$(GRID)" =~ $(REGEXP) ]] && echo true),true)
# Ensure that MET=geos5
REGEXP := ((^[Gg][Ee][Oo][Ss])?5|.5)
ifneq ($(shell [[ "$(MET)" =~ $(REGEXP) ]] && echo true),true)
$(error When GRID=05x0666, you can only use MET=geos5)
endif
# Ensure that a nested-grid option is selected
ifndef NEST
$(error Please select a nested grid option, e.g. NEST=ch, NEST=eu, NEST=na)
else
NEST_NEEDED :=1
USER_DEFS += -DGRID05x0666
endif
endif
# %%%%% 0.25 x 0.3125 %%%%%
REGEXP :=(^025.03125|^0\.25.0\.3125)
ifeq ($(shell [[ "$(GRID)" =~ $(REGEXP) ]] && echo true),true)
# Ensure that MET=geos-fp
REGEXP :=(^[Gg][Ee][Oo][Ss][Ff][Pp])|(^[Gg][Ee][Oo][Ss].[Ff][Pp])
ifneq ($(shell [[ "$(MET)" =~ $(REGEXP) ]] && echo true),true)
$(error When GRID=025x03125, you can only use MET=geos-fp)
endif
# Ensure that a nested-grid option is selected
ifndef NEST
$(error Please select a nested grid option, e.g. NEST=ch, NEST=eu, NEST=na)
else
NEST_NEEDED :=1
USER_DEFS += -DGRID025x03125
endif
endif
# %%%%% ERROR CHECK! Make sure our GRID selection is valid! %%%%%
REGEXP := ((\-DGRID)?4x5|2x25|1x125|05x0666|025x03125)
ifneq ($(shell [[ "$(USER_DEFS)" =~ $(REGEXP) ]] && echo true),true)
$(error $(ERR_GRID))
endif
#------------------------------------------------------------------------------
# Nested grid settings
#------------------------------------------------------------------------------
# %%%%% China (CH) %%%%%
REGEXP :=(^[Cc][Hh])
ifeq ($(shell [[ "$(NEST)" =~ $(REGEXP) ]] && echo true),true)
USER_DEFS += -DNESTED_CH
endif
# %%%%% Europe (EU) %%%%%
REGEXP :=(^[Ee][Uu])
ifeq ($(shell [[ "$(NEST)" =~ $(REGEXP) ]] && echo true),true)
USER_DEFS += -DNESTED_EU
endif
# %%%%% North America (NA) %%%%%
REGEXP :=(^[Nn][Aa])
ifeq ($(shell [[ "$(NEST)" =~ $(REGEXP) ]] && echo true),true)
USER_DEFS += -DNESTED_NA
endif
# %%%%% SE Asia (SE) %%%%%
REGEXP :=(^[Ss][Ee])
ifeq ($(shell [[ "$(NEST)" =~ $(REGEXP) ]] && echo true),true)
USER_DEFS += -DNESTED_SE
endif
# %%%%% ERROR CHECK! Make sure our NEST selection is valid! %%%%%
ifdef NEST_NEEDED
REGEXP :=((\-DNESTED_)?CH|NA|EU)
ifneq ($(shell [[ "$(USER_DEFS)" =~ $(REGEXP) ]] && echo true),true)
$(error $(ERR_NEST))
endif
endif
endif # NO_GRID_NEEDED
#------------------------------------------------------------------------------
# Aerosol microphysics settings
#------------------------------------------------------------------------------
# %%%%% TOMAS, 30 bins (default) %%%%%
REGEXP :=(^[Yy]|^[Yy][Ee][Ss])
ifeq ($(shell [[ "$(TOMAS)" =~ $(REGEXP) ]] && echo true),true)
USER_DEFS += -DTOMAS
endif
# %%%%% TOMAS, 40 bins %%%%%
REGEXP :=(^[Yy]|^[Yy][Ee][Ss])
ifeq ($(shell [[ "$(TOMAS40)" =~ $(REGEXP) ]] && echo true),true)
USER_DEFS += -DTOMAS -DTOMAS40
endif
# %%%%% TOMAS, 15 bins %%%%%
REGEXP :=(^[Yy]|^[Yy][Ee][Ss])
ifeq ($(shell [[ "$(TOMAS15)" =~ $(REGEXP) ]] && echo true),true)
USER_DEFS += -DTOMAS -DTOMAS15
endif
# %%%%% TOMAS, 12 bins %%%%%
REGEXP :=(^[Yy]|^[Yy][Ee][Ss])
ifeq ($(shell [[ "$(TOMAS12)" =~ $(REGEXP) ]] && echo true),true)
USER_DEFS += -DTOMAS -DTOMAS12
endif
# %%%%% APM %%%%%
REGEXP :=(^[Yy]|^[Yy][Ee][Ss])
ifeq ($(shell [[ "$(APM)" =~ $(REGEXP) ]] && echo true),true)
USER_DEFS += -DAPM
endif
#------------------------------------------------------------------------------
# Special chemistry settings
#------------------------------------------------------------------------------
# Specify GTMM mercury model
REGEXP :=(^[Yy]|^[Yy][Ee][Ss])
ifeq ($(shell [[ "$(GTMM_Hg)" =~ $(REGEXP) ]] && echo true),true)
USER_DEFS += -DGTMM_Hg
endif
# Option to turn off ISORROPIA for testing
REGEXP :=(^[Yy]|^[Yy][Ee][Ss])
ifeq ($(shell [[ "$(NO_ISO)" =~ $(REGEXP) ]] && echo true),true)
USER_DEFS += -DNO_ISORROPIA
endif
#------------------------------------------------------------------------------
# HPC Settings: Build & use ESMF & MAPL for the Grid-Independent GEOS-Chem
#------------------------------------------------------------------------------
ifeq ($(shell [[ "$(MAKECMDGOALS)" =~ "hpc" ]] && echo true),true)
include $(ROOTDIR)/GIGC/GIGC.mk
HPC :=yes
endif
REGEXP := (^[Yy]|^[Yy][Ee][Ss])
ifeq ($(shell [[ "$(HPC)" =~ $(REGEXP) ]] && echo true),true)
USER_DEFS += -DESMF_
ESMF_MOD := -I$(ESMF_DIR)/$(ARCH)/mod
ESMF_INC := -I$(ESMF_DIR)/$(ARCH)/include
ESMF_LIB := -lrt $(ESMF_DIR)/$(ARCH)/lib/libesmf.so
MAPL_INC := -I$(ESMADIR)/$(ARCH)/include/MAPL_Base
MAPL_INC += -I$(ESMADIR)/$(ARCH)/include/GMAO_mpeu
MAPL_LIB := -L$(ESMADIR)/$(ARCH)/lib -lMAPL_Base -lMAPL_cfio -lGMAO_mpeu
MPI_INC := $(dir $(shell which mpif90))../include
MPI_LIB := -L$(dir $(shell which mpif90))../lib -lmpi -lmpi_cxx -lmpi_f77 -lmpi_f90 -lopen-rte -lopen-pal
LINK := $(LINK) -lGIGC $(ESMF_LIB) $(MAPL_LIB) $(MPI_LIB)
endif
#==============================================================================
# IFORT compilation options (default)
#==============================================================================
ifeq ($(COMPILER),ifort)
# Default optimization level for all routines (-O2)
ifndef OPT
OPT := -O2
endif
# Pick compiler options for debug run or regular run
REGEXP := (^[Yy]|^[Yy][Ee][Ss])
ifeq ($(shell [[ "$(DEBUG)" =~ $(REGEXP) ]] && echo true),true)
FFLAGS :=-cpp -w -O0 -auto -noalign -convert big_endian
FFLAGS += -g -DDEBUG -check arg_temp_created -check all -debug all
TRACEBACK := yes
else
FFLAGS :=-cpp -w $(OPT) -auto -noalign -convert big_endian
FFLAGS += -vec-report0
FFLAGS += -DUSE_NCDF4
endif
# Prevent any optimizations that would change numerical results
FFLAGS += -fp-model source
# Turn on OpenMP parallelization
REGEXP :=(^[Yy]|^[Yy][Ee][Ss])
ifeq ($(shell [[ "$(OMP)" =~ $(REGEXP) ]] && echo true),true)
FFLAGS += -openmp
endif
# Get Operating System (Linux = Linux; Darwin = MacOSX)
ifndef UNAME
UNAME :=$(shell uname)
endif
# OSX compilation options
ifeq ($(UNAME),Darwin)
FFLAGS += -Wl,-stack_size,0x2cb410000 # Allow 12GB of stack space
ifdef DEBUG
FFLAGS += -g0 -debug -save-temps -fpic -Wl,-no_pie
endif
endif
# Add options for medium memory model. This is to prevent G-C from
# running out of memory at hi-res, especially when using netCDF I/O.
ifneq ($(UNAME),Darwin)
FFLAGS += -mcmodel=medium -shared-intel
endif
# Turn on checking for floating-point exceptions
REGEXP :=(^[Yy]|^[Yy][Ee][Ss])
ifeq ($(shell [[ "$(FPE)" =~ $(REGEXP) ]] && echo true),true)
FFLAGS += -fpe0 -ftrapuv
endif
ifeq ($(shell [[ "$(FPEX)" =~ $(REGEXP) ]] && echo true),true)
FFLAGS += -fpe0 -ftrapuv
endif
# Add special IFORT optimization commands
REGEXP :=(^[Yy]|^[Yy][Ee][Ss])
ifeq ($(shell [[ "$(IPO)" =~ $(REGEXP) ]] && echo true),true)
FFLAGS += -ipo -static
endif
# Add option for "array out of bounds" checking
REGEXP := (^[Yy]|^[Yy][Ee][Ss])
ifeq ($(shell [[ "$(BOUNDS)" =~ $(REGEXP) ]] && echo true),true)
FFLAGS += -check bounds
endif
# Also add traceback option
REGEXP :=(^[Yy]|^[Yy][Ee][Ss])
ifeq ($(shell [[ "$(TRACEBACK)" =~ $(REGEXP) ]] && echo true),true)
FFLAGS += -traceback
endif
# Append the user options in USER_DEFS to FFLAGS
FFLAGS += $(USER_DEFS)
# Include options (i.e. for finding *.h, *.mod files)
INCLUDE := -I$(HDR) -module $(MOD) $(NCI)
# Add include options for ESMF & MAPL
ifeq ($(HPC),yes)
INCLUDE += $(MAPL_INC) $(ESMF_MOD) $(ESMF_INC)
endif
# Set the standard compiler variables
CC :=
F90 :=ifort $(FFLAGS) $(INCLUDE)
LD :=ifort $(FFLAGS)
FREEFORM := -free
R8 := -r8
endif
#==============================================================================
# Portland Group (PGI) compilation options
#==============================================================================
ifeq ($(COMPILER),pgi)
# Default optimization level for all routines (-fast)
ifndef OPT
OPT :=-fast
endif
# Pick compiler options for debug run or regular run
REGEXP := (^[Yy]|^[Yy][Ee][Ss])
ifeq ($(shell [[ "$(DEBUG)" =~ $(REGEXP) ]] && echo true),true)
FFLAGS :=-byteswapio -Mpreprocess -Bstatic -g -O0
else
FFLAGS :=-byteswapio -Mpreprocess -Bstatic $(OPT)
endif
# Add options for medium memory model. This is to prevent G-C from
# running out of memory at hi-res, especially when using netCDF I/O.
FFLAGS += -mcmodel=medium
# Turn on OpenMP parallelization
REGEXP :=(^[Yy]|^[Yy][Ee][Ss])
ifeq ($(shell [[ "$(OMP)" =~ $(REGEXP) ]] && echo true),true)
FFLAGS += -mp -Mnosgimp -Dmultitask
endif
# Add option for suppressing PGI non-uniform memory access (numa) library
REGEXP :=(^[Yy]|^[Yy][Ee][Ss])
ifeq ($(shell [[ "$(NONUMA)" =~ $(REGEXP) ]] && echo true),true)
FFLAGS += -mp=nonuma
endif
# Add option for "array out of bounds" checking
REGEXP :=(^[Yy]|^[Yy][Ee][Ss])
ifeq ($(shell [[ "$(BOUNDS)" =~ $(REGEXP) ]] && echo true),true)
FFLAGS += -C
endif
# Also add traceback option
REGEXP :=(^[Yy]|^[Yy][Ee][Ss])
ifeq ($(shell [[ "$(TRACEBACK)" =~ $(REGEXP) ]] && echo true),true)
FFLAGS += -traceback
endif
# Append the user options in USER_DEFS to FFLAGS
FFLAGS += $(USER_DEFS)
# Include options (i.e. for finding *.h, *.mod files)
INCLUDE := -I$(HDR) -module $(MOD) $(NCI)
# Set the standard compiler variables
CC :=gcc
F90 :=pgf90 $(FFLAGS) $(INCLUDE)
LD :=pgf90 $(FFLAGS)
FREEFORM := -Mfree
R8 := -Mextend -r8
endif
#==============================================================================
# Specify pattern rules for compiliation
# (i.e. tell "make" how to compile different types of source code files)
#==============================================================================
%.o : %.f
$(F90) -c $<
%.o : %.F
$(F90) -c $<
%.o : %.f90
$(F90) -c $(FREEFORM) $<
%.o : %.F90
$(F90) -c $(FREEFORM) $<
%.o : %.c
$(CC) -c $*.c
#==============================================================================
# Export global variables so that the main Makefile will see these
#==============================================================================
export CC
export F90
export FREEFORM
export LD
export LINK
export R8
export SHELL
export NCL
export HPC
#EOC
#==============================================================================
# Print variables for testing/debugging purposes (uncomment if necessary)
#=============================================================================
#headerinfo:
# @@echo '####### in Makefile_header.mk ########'
# @@echo "compiler: $(COMPILER)"
# @@echo "debug : $(DEBUG)"
# @@echo "bounds : $(BOUNDS)"
# @@echo "f90 : $(F90)"
# @@echo "cc : $(CC)"
# @@echo "include : $(INCLUDE)"
# @@echo "link : $(LINK)"
# @@echo "userdefs: $(USER_DEFS)"