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dvitsios committed Apr 29, 2020
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Expand Up @@ -189,7 +189,7 @@ mantisml-overlap -c [config_file] -o [output_dir] -e [external_ranked_file]
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#### `mantisml-overlap` external ranked file [-e]
The external ranked gene list file may contain a single column with ranked genes or 2 columns, with the 2nd column containing p-values. Examples of external ranked lists for both cases are available at [example-input](example-input).
The external ranked gene list file may contain a __single column__ with ranked genes or __two columns__ (tab-delimited), with the 2nd column containing p-values. Examples of external ranked lists for both cases are available at [example-input](example-input).


#### `mantisml-overlap` Output
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