deps: bump some dependencies and rust version #110

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Run time

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Job	Run time
Tests Advanced CLI	1m 50s
Tests Advanced CLI	1s
Tests Advanced CLI	1m 55s
Tests Simple CLI	1s
Tests Simple CLI	1m 48s
Tests Simple CLI	3m 18s
Tests Silo CLI	1m 40s
Tests Silo CLI	1m 52s
Tests Silo CLI	2m 27s
	14m 52s