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Axon and myelin segmentation model in histology images to quantify myelination in the human brain. Training data was acquired in the uncinate fasciculus using CARS microscopy.

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axondeepseg/model-seg-human-brain-cars

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model-seg-human-brain-cars

Axon and myelin segmentation model in histology images to quantify myelination in the human brain. Training data was acquired in the uncinate fasciulus using CARS microscopy.

How to train

Click here

TODO: add BIDS-to-nnunet data preparation script when we get more data TODO: instructions

How to use

TODO: redirect to nn-axondeepseg for now

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Axon and myelin segmentation model in histology images to quantify myelination in the human brain. Training data was acquired in the uncinate fasciculus using CARS microscopy.

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