From 643b0f7ab3488085da502f0dd22e279d1a722736 Mon Sep 17 00:00:00 2001
From: Blaise deB Frederick <blaise.frederick@gmail.com>
Date: Tue, 10 Oct 2023 15:58:09 -0400
Subject: [PATCH] Trying to get pypi build working again

---
 .github/workflows/python-publish.yml |  7 ++++++-
 testdocker.sh                        | 17 +++++++++++++++++
 2 files changed, 23 insertions(+), 1 deletion(-)

diff --git a/.github/workflows/python-publish.yml b/.github/workflows/python-publish.yml
index ed49a6d14..8d4497bed 100644
--- a/.github/workflows/python-publish.yml
+++ b/.github/workflows/python-publish.yml
@@ -17,15 +17,20 @@ jobs:
     - name: Set up Python
       uses: actions/setup-python@v4
       with:
-        python-version: '3.10'
+        python-version: '3.11'
+        ref: ${{ github.head_ref }}   # checkout the correct branch name
+        fetch-depth: 0
+
     - name: Install dependencies
       run: |
         python -m pip install --upgrade pip
         pip install setuptools wheel twine
+
     - name: Build and publish
       env:
         TWINE_USERNAME: ${{ secrets.PYPI_USERNAME }}
         TWINE_PASSWORD: ${{ secrets.PYPI_PASSWORD }}
       run: |
+        git fetch --prune --unshallow
         python setup.py sdist bdist_wheel
         twine upload dist/*
diff --git a/testdocker.sh b/testdocker.sh
index 3dd9f443f..89c12873a 100755
--- a/testdocker.sh
+++ b/testdocker.sh
@@ -19,6 +19,23 @@ docker run \
         --nprocs 4 \
         --noglm
 
+docker run \
+    --rm \
+    --ipc host \
+    --mount type=bind,source=/Users/frederic/code/rapidtide/rapidtide/data/examples,destination=/data \
+    -it \
+    -v /tmp/.X11-unix:/tmp/.X11-unix \
+    -u rapidtide fredericklab/rapidtide:latest \
+    rapidtide \
+        /data/src/sub-RAPIDTIDETEST.nii.gz \
+        /data/dst/sub-RAPIDTIDETEST_disabledockermemfix \
+        --disabledockermemfix \
+        --passes 3 \
+        --nprocs 4 \
+        --noglm
+
+exit
+
 docker run \
     --rm \
     --ipc host \