Dev (#51)

* cicd check

* fix danepubliczne.imgw.pl to dane.imgw.pl

* fix for empty ogimet

* fix link

* test github actions

* Update R-CMD-check.yaml

.Rbuildignore

@@ -10,3 +10,4 @@
 ^data-raw$
 ^vignettes/articles$
 
+^\.github$

.github/.gitignore

@@ -0,0 +1 @@
+*.html

.github/workflows/R-CMD-check.yaml

@@ -0,0 +1,103 @@
+# NOTE: This workflow is overkill for most R packages
+# check-standard.yaml is likely a better choice
+# usethis::use_github_action("check-standard") will install it.
+#
+# For help debugging build failures open an issue on the RStudio community with the 'github-actions' tag.
+# https://community.rstudio.com/new-topic?category=Package%20development&tags=github-actions
+on:
+  push:
+    branches:
+      - main
+      - master
+  pull_request:
+    branches:
+      - main
+      - master
+
+name: R-CMD-check
+
+jobs:
+  R-CMD-check:
+    runs-on: ${{ matrix.config.os }}
+
+    name: ${{ matrix.config.os }} (${{ matrix.config.r }})
+
+    strategy:
+      fail-fast: false
+      matrix:
+        config:
+          - {os: macOS-latest,   r: 'release'}
+          - {os: windows-latest, r: 'release'}
+          - {os: windows-latest, r: '3.6'}
+          - {os: ubuntu-16.04,   r: 'devel', rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest", http-user-agent: "R/4.0.0 (ubuntu-16.04) R (4.0.0 x86_64-pc-linux-gnu x86_64 linux-gnu) on GitHub Actions" }
+          - {os: ubuntu-16.04,   r: 'release', rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
+          - {os: ubuntu-16.04,   r: 'oldrel',  rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
+          - {os: ubuntu-16.04,   r: '3.5',     rspm: "https://packagemanager.rstudio.com/cran/__linux__/xenial/latest"}
+    env:
+      R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
+      RSPM: ${{ matrix.config.rspm }}
+      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+
+    steps:
+      - uses: actions/checkout@v2
+
+      - uses: r-lib/actions/setup-r@v1
+        with:
+          r-version: ${{ matrix.config.r }}
+          http-user-agent: ${{ matrix.config.http-user-agent }}
+
+      - uses: r-lib/actions/setup-pandoc@v1
+
+      - name: Query dependencies
+        run: |
+          install.packages('remotes')
+          saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
+          writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
+        shell: Rscript {0}
+
+      - name: Cache R packages
+        if: runner.os != 'Windows'
+        uses: actions/cache@v2
+        with:
+          path: ${{ env.R_LIBS_USER }}
+          key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
+          restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-
+
+      - name: Install system dependencies
+        if: runner.os == 'Linux'
+        run: |
+          while read -r cmd
+          do
+            eval sudo $cmd
+          done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "16.04"))')
+
+      - name: Install dependencies
+        run: |
+          remotes::install_deps(dependencies = TRUE)
+          remotes::install_cran("rcmdcheck")
+        shell: Rscript {0}
+
+      - name: Session info
+        run: |
+          options(width = 100)
+          pkgs <- installed.packages()[, "Package"]
+          sessioninfo::session_info(pkgs, include_base = TRUE)
+        shell: Rscript {0}
+
+      - name: Check
+        env:
+          _R_CHECK_CRAN_INCOMING_: false
+        run: rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran"), error_on = "warning", check_dir = "check")
+        shell: Rscript {0}
+
+      - name: Show testthat output
+        if: always()
+        run: find check -name 'testthat.Rout*' -exec cat '{}' \; || true
+        shell: bash
+
+      - name: Upload check results
+        if: failure()
+        uses: actions/upload-artifact@main
+        with:
+          name: ${{ runner.os }}-r${{ matrix.config.r }}-results
+          path: check

DESCRIPTION

@@ -1,6 +1,6 @@
 Package: climate
 Title: Interface to Download Meteorological (and Hydrological) Datasets
-Version: 0.9.8
+Version: 0.9.9
 Authors@R: c(person(given = "Bartosz",
            family = "Czernecki",
            role = c("aut", "cre"),

R/hydro_imgw.R

@@ -1,12 +1,12 @@
 #' Hydrological data from IMGW
 #'
-#' Downloading hourly, daily, and monthly hydrological data from the measurement stations available in the danepubliczne.imgw.pl collection
+#' Downloading hourly, daily, and monthly hydrological data from the measurement stations available in the dane.imgw.pl collection
 #'
 #' @param interval temporal resolution of the data ("daily" , "monthly", or "semiannual_and_annual")
 #' @param year vector of years (e.g., 1966:2000)
 #' @param coords add coordinates of the stations (logical value TRUE or FALSE)
 #' @param value type of data (can be: state - "H" (default), flow - "Q", or temperature - "T")
-#' @param station vector of hydrological stations danepubliczne.imgw.pl; can be given as station name with CAPITAL LETTERS (character)
+#' @param station vector of hydrological stations dane.imgw.pl; can be given as station name with CAPITAL LETTERS (character)
 #' It accepts either names (characters in CAPITAL LETTERS) or stations' IDs (numeric)
 #' @param col_names three types of column names possible: "short" - default, values with shorten names, "full" - full English description, "polish" - original names in the dataset
 #' @param ... other parameters that may be passed to the 'shortening' function that shortens column names

R/hydro_imgw_annual.R

@@ -1,7 +1,7 @@
 #' Semi-annual and annual hydrological data
 #'
 #' Downloading hydrological data for the semi-annual and annual period
-#' available in the danepubliczne.imgw.pl collection
+#' available in the dane.imgw.pl collection
 #'
 #' @param year vector of years (e.g., 1966:2000)
 #' @param coords add coordinates of the stations (logical value TRUE or FALSE)

R/hydro_imgw_daily.R

@@ -1,6 +1,6 @@
 #' Daily hydrological data
 #'
-#' Downloading daily hydrological data from the danepubliczne.imgw.pl collection
+#' Downloading daily hydrological data from the dane.imgw.pl collection
 #'
 #' @param year vector of years (e.g., 1966:2000)
 #' @param coords add coordinates of the stations (logical value TRUE or FALSE)

R/hydro_imgw_monthly.R

@@ -1,6 +1,6 @@
 #' Monthly hydrological data
 #'
-#' Downloading monthly hydrological data from the danepubliczne.imgw.pl collection
+#' Downloading monthly hydrological data from the dane.imgw.pl collection
 #'
 #' @param year vector of years (e.g., 1966:2000)
 #' @param coords add coordinates of the stations (logical value TRUE or FALSE)

R/hydro_metadata_imgw.R

@@ -1,6 +1,6 @@
 #' Hydrological metadata
 #'
-#' Downloading the description (metadata) to hydrological data available in the danepubliczne.imgw.pl repository.
+#' Downloading the description (metadata) to hydrological data available in the dane.imgw.pl repository.
 #' By default, the function returns a list or data frame for a selected subset
 #`
 #' @param interval temporal resolution of the data ("daily" , "monthly", or "semiannual_and_annual")

R/hydro_shortening_imgw.R

@@ -1,6 +1,6 @@
 #' Shortening column names for hydrological variables
 #'
-#' Shortening column names of hydrological parameters to improve the readability of downloaded dataset from the danepubliczne.imgw.pl collection and removing duplicated column names
+#' Shortening column names of hydrological parameters to improve the readability of downloaded dataset from the dane.imgw.pl collection and removing duplicated column names
 #'
 #' @param data downloaded dataset with original column names
 #' @param col_names three types of column names possible: "short" - default, values with shorten names, "full" - full English description, "polish" - original names in the dataset

R/imgw_hydro_abbrev.R

@@ -1,5 +1,5 @@
 #' @name imgw_hydro_abbrev
-#' @title Definitions of hydrological parameters used for shortening column names from the danepubliczne.imgw.pl collection
+#' @title Definitions of hydrological parameters used for shortening column names from the dane.imgw.pl collection
 #'
 #' @description The object contains 3 columns that are currently used for improving readability of the downloaded dataset:
 #' fullname, abbr_eng, and fullname_eng

R/imgw_hydro_stations.R

@@ -1,5 +1,5 @@
 #' @name imgw_hydro_stations
-#' @title Location of the hydrological stations from the danepubliczne.imgw.pl collection
+#' @title Location of the hydrological stations from the dane.imgw.pl collection
 #'
 #' @description The object contains weather stations
 #' coordinates, ID numbers, and elevations

R/imgw_meteo_abbrev.R

@@ -1,5 +1,5 @@
 #' @name imgw_meteo_abbrev
-#' @title Definitions of meteorological parameters used for shortening column names for the meteorological data from the danepubliczne.imgw.pl collection
+#' @title Definitions of meteorological parameters used for shortening column names for the meteorological data from the dane.imgw.pl collection
 #'
 #' @description The object contains 3 columns that are currently used for improving readability of the downloaded dataset:
 #' fullname, abbr_eng, and fullname_eng

R/imgw_meteo_stations.R

@@ -1,5 +1,5 @@
 #' @name imgw_meteo_stations
-#' @title Location of the meteorological stations from the danepubliczne.imgw.pl collection
+#' @title Location of the meteorological stations from the dane.imgw.pl collection
 #'
 #' @description The object contains weather stations
 #' coordinates, ID numbers, and elevations

R/meteo_imgw.R

@@ -1,6 +1,6 @@
 #' Meteorological data from IMGW
 #'
-#' Downloading hourly, daily, and monthly meteorological data from the SYNOP / CLIMATE / PRECIP stations available in the danepubliczne.imgw.pl collection
+#' Downloading hourly, daily, and monthly meteorological data from the SYNOP / CLIMATE / PRECIP stations available in the dane.imgw.pl collection
 #'
 #' @param interval temporal resolution of the data ("hourly", "daily", "monthly")
 #' @param rank rank of the stations: "synop" (default), "climate" or "precip"
@@ -9,7 +9,7 @@
 #' @param coords add coordinates of the station (logical value TRUE or FALSE)
 #' @param col_names three types of column names possible: "short" - default, values with shorten names, "full" - full English description, "polish" - original names in the dataset
 #' @param ... other parameters that may be passed to the 'shortening' function that shortens column names
-#' @param station vector of hydrological stations danepubliczne.imgw.pl can be name of station CAPITAL LETTERS(character)
+#' @param station vector of hydrological stations dane.imgw.pl can be name of station CAPITAL LETTERS(character)
 #' It accepts names (characters in CAPITAL LETTERS) or stations' IDs (numeric)
 #' @export
 #' @return A data.frame with columns describing the meteorological parameters (e.g. temperature, wind speed, precipitation) where each row represent a measurement,

R/meteo_imgw_daily.R

@@ -1,6 +1,6 @@
 #' Daily IMGW meteorological data
 #'
-#' Downloading daily (meteorological) data from the SYNOP / CLIMATE / PRECIP stations available in the danepubliczne.imgw.pl collection
+#' Downloading daily (meteorological) data from the SYNOP / CLIMATE / PRECIP stations available in the dane.imgw.pl collection
 #'
 #' @param rank rank of the stations: "synop" (default), "climate", or "precip"
 #' @param year vector of years (e.g., 1966:2000)

R/meteo_imgw_hourly.R

@@ -1,6 +1,6 @@
 #' Hourly IMGW meteorological data
 #'
-#' Downloading hourly (meteorological) data from the SYNOP / CLIMATE / PRECIP stations available in the danepubliczne.imgw.pl collection
+#' Downloading hourly (meteorological) data from the SYNOP / CLIMATE / PRECIP stations available in the dane.imgw.pl collection
 #'
 #' @param rank rank of the stations: "synop" (default), "climate", or "precip"
 #' @param year vector of years (e.g., 1966:2000)

R/meteo_imgw_monthly.R

@@ -1,6 +1,6 @@
 #' Monthly IMGW meteorological data
 #'
-#' Downloading monthly (meteorological) data from the SYNOP / CLIMATE / PRECIP stations available in the danepubliczne.imgw.pl collection
+#' Downloading monthly (meteorological) data from the SYNOP / CLIMATE / PRECIP stations available in the dane.imgw.pl collection
 #'
 #' @param rank rank of the stations: "synop" (default), "climate", or "precip"
 #' @param year vector of years (e.g., 1966:2000)

R/meteo_metadata_imgw.R

@@ -1,6 +1,6 @@
 #' Meteorological metadata
 #'
-#' Downloading the description (metadata) to the meteorological data available in the danepubliczne.imgw repository.imgw.pl.
+#' Downloading the description (metadata) to the meteorological data available in the dane.imgw repository.imgw.pl.
 #' By default, the function returns a list or data frame for a selected subset
 #'
 #' @param interval temporal resolution of the data ("hourly", "daily", "monthly")

R/meteo_shortening_imgw.R

@@ -1,6 +1,6 @@
 #' Shortening column names for meteorological variables
 #'
-#' Shortening column names of meteorological parameters to improve the readability of downloaded dataset from the danepubliczne.imgw.pl collection and removing duplicated column names 
+#' Shortening column names of meteorological parameters to improve the readability of downloaded dataset from the dane.imgw.pl collection and removing duplicated column names 
 #'
 #' @param data downloaded dataset with original column names
 #' @param col_names three types of column names possible: "short" - default, values with shorten names, "full" - full English description, "polish" - original names in the dataset