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Phase I: gDR integration #129

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ChristopherEeles opened this issue Oct 5, 2021 · 0 comments
Open
5 tasks

Phase I: gDR integration #129

ChristopherEeles opened this issue Oct 5, 2021 · 0 comments
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ChristopherEeles commented Oct 5, 2021 •
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  • Update LongTable -> BumpyMatrix conversion to use as.data.table as an intermediate format
  • Input LongTable -> SummarizedExperiment object into gDR pipeline
  • Match BumpyMatrix from LongTable to gDR input format.
  • Ensure SummarizedExperiment made from LongTable has correct names for input to gDR pipeline
  • Visualize LongTable derived gDR object after running pipeline methods
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