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flash bump #9088

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flash bump #9088

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31ef859
flash bump
mictadlo May 30, 2018
b1c3f0f
change flash to flash2
mictadlo May 31, 2018
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2 changes: 1 addition & 1 deletion recipes/flash/build.sh
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Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
#!/bin/bash
make
mkdir -p $PREFIX/bin
cp -p $SRC_DIR/flash $PREFIX/bin/
cp -p $SRC_DIR/flash2 $PREFIX/bin/
26 changes: 13 additions & 13 deletions recipes/flash/meta.yaml
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Original file line number Diff line number Diff line change
@@ -1,14 +1,17 @@
build:
number: 1
{% set name = "flash" %}
{% set version = "2.2.00" %}

package:
name: flash
version: '1.2.11'
name: {{ name|lower }}
version: {{ version }}

build:
number: 1
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start with 0


source:
fn: FLASH-1.2.11.tar.gz
url: https://sourceforge.net/projects/flashpage/files/FLASH-1.2.11.tar.gz
sha256: 685ca6f7fedda07434d8ee03c536f4763385671c4509c5bb48beb3055fd236ac
fn: {{ name|lower }}_{{ version }}.tar.gz
url: https://github.com/dstreett/FLASH2/archive/{{ version }}.tar.gz
sha256: 7bb357a935de87be8a294b35ed281eca2e08afa1e1a1d1b1c24a024b80b713ff

requirements:
build:
Expand All @@ -21,13 +24,10 @@ requirements:

test:
commands:
- flash -v
- flash2 -v

about:
home: https://ccb.jhu.edu/software/FLASH/
home: https://github.com/dstreett/FLASH2
license: GPLv3+
summary: 'Merge mates from fragments that are shorter than twice the read length'
summary: 'Merge paired-end reads from fragments that are shorter than twice the read length'

extra:
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Why have you removed this? its still the same tool isn't it?
Is there a publication which we can reference?

identifiers:
- biotools:flash