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setup.py
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setup.py
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from setuptools import setup
from setuptools import Extension
#from Cython.Build import cythonize
from codecs import open
from os import path
import numpy as np
VERSION = '2016.8'
# Get the long description from the relevant file
with open(path.join('README.rst'), encoding='utf-8') as f:
LONG_DESCRIPTION = f.read()
setup(
name='fabia',
version=VERSION,
description='Fabia Biclustering Algorithm',
long_description=LONG_DESCRIPTION,
url='https://github.com/bioinf-jku/pyfabia',
# Author details
author='Thomas Unterthiner',
author_email='unterthiner@bioinf.jku.at',
# Choose your license
license='GPL v2',
# See https://pypi.python.org/pypi?%3Aaction=list_classifiers
classifiers=['Intended Audience :: Science/Research',
'Topic :: Scientific/Engineering',
'Topic :: Software Development',
'License :: OSI Approved :: BSD License',
'Programming Language :: Python :: 2',
'Programming Language :: Python :: 2.6',
'Programming Language :: Python :: 2.7',
'Programming Language :: Python :: 3',
'Programming Language :: Python :: 3.3',
'Programming Language :: Python :: 3.4',
'Programming Language :: Python :: 3.5',
'Programming Language :: Python :: 3.6',
],
keywords='Machine Learning Biclustering Fabia',
packages=['fabia'],
#ext_modules = cythonize([Extension("fabia._fabia", ["fabia/_fabia.pyx"], include_dirs=[np.get_include()],)]),
ext_modules = [Extension("fabia._fabia", ["fabia/_fabia.c"],
include_dirs=[np.get_include()])],
install_requires=["scipy>=0.16.0", "scikit-learn>=0.16.1"],
)