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Polus

A powerful tensorflow toolkit for creating/training complex deep learning models in a functional way.

This toolkit is currently under development and aims to focus on biomedical tasks, although it can also also be used in other domains.

Installation

pip install polus

For training the models in multiGPU scenario, polus leverage the horovod library for dataparalelism, which means that horovod must be correctly installed to be able to run the training in multiGPUs.

To easy this process we made available a docker image with all the correct dependencies to perform the multiGPU training in polus.

docker pull talmeidawastaken/polus

Documentation

Still in work, but some of it can be already consulted here: https://bioinformatics-ua.github.io/polus/

Team

  • Tiago Almeida1
  • Rui Antunes1
  • Sérgio Matos1
  1. University of Aveiro, Dept. Electronics, Telecommunications and Informatics (DETI / IEETA), Aveiro, Portugal