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Update print tutorial hr#118

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Erikpostt merged 69 commits intomainbiomarkersParkinson/paradigma:mainfrom update_print_tutorial_hrbiomarkersParkinson/paradigma:update_print_tutorial_hrCopy head branch name to clipboardJan 17, 2025

+100-176

Commits

Commits on Dec 3, 2024

• Start heart rate estimation including tfd

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• Merge branch 'main' of https://github.com/biomarkersParkinson/paradigma into heart_rate_estimation

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• stash updates

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Commits on Dec 4, 2024

• Merge branch 'main' of https://github.com/biomarkersParkinson/paradigma into heart_rate_estimation

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• update based on merge conflicts

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Commits on Dec 6, 2024

• update hr main function

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• Merge branch 'main' of https://github.com/biomarkersParkinson/paradigma into heart_rate_estimation

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• update minor stuff matlab files

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• change tfd parameters to dict

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Commits on Dec 11, 2024

• First steps to refactoring to numpy

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• Merge branch 'main' of https://github.com/biomarkersParkinson/paradigma into heart_rate_estimation

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• Finalizing heart rate pipeline plus renaming preprocessing to acc instead of imu

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• setting execution count to null

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• fix output types

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• fixing pytype due to old configs

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Commits on Dec 12, 2024

• fix min_hr_samples pytype error

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Commits on Dec 30, 2024

• remove irrelevant config

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• resolved comments PR reviewer

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• Merge branch 'main' of https://github.com/biomarkersParkinson/paradigma into heart_rate_estimation

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• remove data type since it causes pytype error

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• clear execution count

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• Merge branch 'pandas-to-numpy-ppg' of https://github.com/biomarkersParkinson/paradigma into pandas-to-numpy-ppg

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Commits on Dec 31, 2024

• import heart_rate_estimation

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• Merge branch 'main' of https://github.com/biomarkersParkinson/paradigma into pandas-to-numpy-ppg

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• merge updates

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Commits on Jan 2, 2025

• Merge branch 'create-prepared-data' of https://github.com/biomarkersParkinson/paradigma into pandas-to-numpy-ppg

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• update ppg_analysis

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• Merge branch 'main' of https://github.com/biomarkersParkinson/paradigma into pandas-to-numpy-ppg

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Commits on Jan 4, 2025

• replace df to numpy arrays

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• fix notebook

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Commits on Jan 6, 2025

• adding accelerometer feature

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• fix type error list vs float

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• implement accelerometer feature

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Commits on Jan 7, 2025

• update matlab file based on refactoring

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  5a3a63a

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• fixing types, docstrings and readibility

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• Merge branch 'pandas-to-numpy-ppg' of https://github.com/biomarkersParkinson/paradigma into adding-accelerometer-to-ppg

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• adding documentation acc feature

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• add documentation of autocorrelation

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• Merge branch 'pandas-to-numpy-ppg' of https://github.com/biomarkersParkinson/paradigma into adding-accelerometer-to-ppg

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• adjust classification and HR estimation based on accelerometer

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Commits on Jan 8, 2025

• Made requested changes

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• fix config

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• Merge branch 'main' of https://github.com/biomarkersParkinson/paradigma into heart-rate-aggregation

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Commits on Jan 9, 2025

• adding aggregation heart rate

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• Merge branch 'main' of https://github.com/biomarkersParkinson/paradigma into heart-rate-aggregation

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Commits on Jan 10, 2025

• Merge branch 'main' of https://github.com/biomarkersParkinson/paradigma into heart-rate-aggregation

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• update aggregates

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• remove config

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• Merge branch 'main' of https://github.com/biomarkersParkinson/paradigma into heart-rate-aggregation

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• Merge branch 'heart-rate-aggregation' of https://github.com/biomarkersParkinson/paradigma into tutorial-ppg

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• add start tutorial

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• aggregation implementation with dictionary

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• Merge branch 'main' of https://github.com/biomarkersParkinson/paradigma into heart-rate-aggregation

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  e10afd9

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• add lines for consistency

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• moved windoweddataextractor to segmenting

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• Merge branch 'heart-rate-aggregation' of https://github.com/biomarkersParkinson/paradigma into tutorial-ppg

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• Merge branch 'main' of https://github.com/biomarkersParkinson/paradigma into tutorial-ppg

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• resolve merge conflict

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Commits on Jan 12, 2025

• update loading + preprocessing with seperate functionality

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Commits on Jan 13, 2025

• update tutorial notebook and corresponding notebook

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• Merge branch 'main' of https://github.com/biomarkersParkinson/paradigma into tutorial-ppg

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• Update test to io function

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• Merge branch 'main' of https://github.com/biomarkersParkinson/paradigma

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Commits on Jan 14, 2025

• Merge branch 'main' of https://github.com/biomarkersParkinson/paradigma

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Commits on Jan 16, 2025

• Merge branch 'main' of https://github.com/biomarkersParkinson/paradigma

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• Merge branch 'main' of https://github.com/biomarkersParkinson/paradigma

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Commits on Jan 17, 2025

• Merge branch 'main' of https://github.com/biomarkersParkinson/paradigma

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• Merge branch 'main' of https://github.com/biomarkersParkinson/paradigma

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• update tutorials functional links + preprocessing

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