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Updating compiled documentation
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biosimulatorsdaemon committed Jul 24, 2023
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18 changes: 18 additions & 0 deletions docs/_static/basic.css
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margin-left: 30px;
}

.sig dd {
margin-top: 0px;
margin-bottom: 0px;
}

.sig dl {
margin-top: 0px;
margin-bottom: 0px;
}

dl > dd:last-child,
dl > dd:last-child > :last-child {
margin-bottom: 0;
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cursor: help;
}

.translated {
background-color: rgba(207, 255, 207, 0.2)
}

.untranslated {
background-color: rgba(255, 207, 207, 0.2)
}

/* -- code displays --------------------------------------------------------- */

pre {
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2 changes: 1 addition & 1 deletion docs/_static/documentation_options.js
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@@ -1,6 +1,6 @@
var DOCUMENTATION_OPTIONS = {
URL_ROOT: document.getElementById("documentation_options").getAttribute('data-url_root'),
VERSION: '0.1.33',
VERSION: '0.1.34',
LANGUAGE: 'en',
COLLAPSE_INDEX: false,
BUILDER: 'html',
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12 changes: 6 additions & 6 deletions docs/about.html
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<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="viewport" content="width=device-width, initial-scale=1" />

<title>About BioSimulators-tellurium &#8212; BioSimulators-tellurium 0.1.33 documentation</title>
<title>About BioSimulators-tellurium &#8212; BioSimulators-tellurium 0.1.34 documentation</title>



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<link rel="preload" as="font" type="font/woff2" crossorigin href="_static/vendor/fontawesome/6.1.2/webfonts/fa-brands-400.woff2" />
<link rel="preload" as="font" type="font/woff2" crossorigin href="_static/vendor/fontawesome/6.1.2/webfonts/fa-regular-400.woff2" />

<link rel="stylesheet" type="text/css" href="_static/pygments.css" />
<link rel="stylesheet" type="text/css" href="_static/pygments.css?v=b76e3c8a" />
<link rel="icon" sizes="16x16" type="image/png" href="https://github.com/biosimulations/biosimulations/raw/dev/libs/shared/assets/src/assets/icons/favicon-16x16.png" />
<link rel="icon" sizes="32x32" type="image/png" href="https://github.com/biosimulations/biosimulations/raw/dev/libs/shared/assets/src/assets/icons/favicon-32x32.png" />
<link rel="stylesheet" type="text/css" href="_static/css/biosimulators.css" />
<link rel="stylesheet" type="text/css" href="_static/css/biosimulators.css?v=ff938351" />

<!-- Pre-loaded scripts that we'll load fully later -->
<link rel="preload" as="script" href="_static/scripts/bootstrap.js?digest=e353d410970836974a52" />
<link rel="preload" as="script" href="_static/scripts/pydata-sphinx-theme.js?digest=e353d410970836974a52" />

<script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
<script src="_static/doctools.js"></script>
<script src="_static/sphinx_highlight.js"></script>
<script data-url_root="./" id="documentation_options" src="_static/documentation_options.js?v=f731d76b"></script>
<script src="_static/doctools.js?v=888ff710"></script>
<script src="_static/sphinx_highlight.js?v=4825356b"></script>
<script>DOCUMENTATION_OPTIONS.pagename = 'about';</script>
<link rel="author" title="About these documents" href="#" />
<link rel="index" title="Index" href="genindex.html" />
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52 changes: 36 additions & 16 deletions docs/genindex.html
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<head>
<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<title>Index &#8212; BioSimulators-tellurium 0.1.33 documentation</title>
<title>Index &#8212; BioSimulators-tellurium 0.1.34 documentation</title>



Expand All @@ -27,18 +27,18 @@
<link rel="preload" as="font" type="font/woff2" crossorigin href="_static/vendor/fontawesome/6.1.2/webfonts/fa-brands-400.woff2" />
<link rel="preload" as="font" type="font/woff2" crossorigin href="_static/vendor/fontawesome/6.1.2/webfonts/fa-regular-400.woff2" />

<link rel="stylesheet" type="text/css" href="_static/pygments.css" />
<link rel="stylesheet" type="text/css" href="_static/pygments.css?v=b76e3c8a" />
<link rel="icon" sizes="16x16" type="image/png" href="https://github.com/biosimulations/biosimulations/raw/dev/libs/shared/assets/src/assets/icons/favicon-16x16.png" />
<link rel="icon" sizes="32x32" type="image/png" href="https://github.com/biosimulations/biosimulations/raw/dev/libs/shared/assets/src/assets/icons/favicon-32x32.png" />
<link rel="stylesheet" type="text/css" href="_static/css/biosimulators.css" />
<link rel="stylesheet" type="text/css" href="_static/css/biosimulators.css?v=ff938351" />

<!-- Pre-loaded scripts that we'll load fully later -->
<link rel="preload" as="script" href="_static/scripts/bootstrap.js?digest=e353d410970836974a52" />
<link rel="preload" as="script" href="_static/scripts/pydata-sphinx-theme.js?digest=e353d410970836974a52" />

<script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
<script src="_static/doctools.js"></script>
<script src="_static/sphinx_highlight.js"></script>
<script data-url_root="./" id="documentation_options" src="_static/documentation_options.js?v=f731d76b"></script>
<script src="_static/doctools.js?v=888ff710"></script>
<script src="_static/sphinx_highlight.js?v=4825356b"></script>
<script>DOCUMENTATION_OPTIONS.pagename = 'genindex';</script>
<link rel="author" title="About these documents" href="about.html" />
<link rel="index" title="Index" href="#" />
Expand Down Expand Up @@ -316,10 +316,18 @@ <h1 id="index">Index</h1>
<h2 id="A">A</h2>
<table style="width: 100%" class="indextable genindextable"><tr>
<td style="width: 33%; vertical-align: top;"><ul>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.PreprocesssedTask.algorithm_kisao_id">algorithm_kisao_id (biosimulators_tellurium.data_model.PreprocesssedTask attribute)</a>, <a href="source/biosimulators_tellurium.html#id5">[1]</a>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.PreprocesssedTask.algorithm_kisao_id">algorithm_kisao_id (biosimulators_tellurium.data_model.PreprocesssedTask attribute)</a>

<ul>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.PreprocesssedTask.algorithm_kisao_id">(biosimulators_tellurium.PreprocesssedTask attribute)</a>, <a href="source/biosimulators_tellurium.html#id0">[1]</a>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.PreprocesssedTask.algorithm_kisao_id">(biosimulators_tellurium.PreprocesssedTask attribute)</a>
</li>
</ul></li>
</ul></td>
<td style="width: 33%; vertical-align: top;"><ul>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.PreprocesssedTask.algorithm_kisao_ids">algorithm_kisao_ids (biosimulators_tellurium.data_model.PreprocesssedTask attribute)</a>

<ul>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.PreprocesssedTask.algorithm_kisao_ids">(biosimulators_tellurium.PreprocesssedTask attribute)</a>
</li>
</ul></li>
</ul></td>
Expand Down Expand Up @@ -418,10 +426,16 @@ <h2 id="M">M</h2>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.PlottingEngine.matplotlib">(biosimulators_tellurium.PlottingEngine attribute)</a>
</li>
</ul></li>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.PreprocesssedTask.model_change_target_tellurium_id_map">model_change_target_tellurium_id_map (biosimulators_tellurium.data_model.PreprocesssedTask attribute)</a>, <a href="source/biosimulators_tellurium.html#id6">[1]</a>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.PreprocesssedTask.model_change_target_tellurium_id_map">model_change_target_tellurium_id_map (biosimulators_tellurium.data_model.PreprocesssedTask attribute)</a>

<ul>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.PreprocesssedTask.model_change_target_tellurium_id_map">(biosimulators_tellurium.PreprocesssedTask attribute)</a>
</li>
</ul></li>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.PreprocesssedTask.model_change_target_tellurium_id_maps">model_change_target_tellurium_id_maps (biosimulators_tellurium.data_model.PreprocesssedTask attribute)</a>

<ul>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.PreprocesssedTask.model_change_target_tellurium_id_map">(biosimulators_tellurium.PreprocesssedTask attribute)</a>, <a href="source/biosimulators_tellurium.html#id1">[1]</a>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.PreprocesssedTask.model_change_target_tellurium_id_maps">(biosimulators_tellurium.PreprocesssedTask attribute)</a>
</li>
</ul></li>
</ul></td>
Expand Down Expand Up @@ -479,10 +493,10 @@ <h2 id="P">P</h2>
<h2 id="R">R</h2>
<table style="width: 100%" class="indextable genindextable"><tr>
<td style="width: 33%; vertical-align: top;"><ul>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.PreprocesssedTask.road_runner">road_runner (biosimulators_tellurium.data_model.PreprocesssedTask attribute)</a>, <a href="source/biosimulators_tellurium.html#id7">[1]</a>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.PreprocesssedTask.road_runners">road_runners (biosimulators_tellurium.data_model.PreprocesssedTask attribute)</a>, <a href="source/biosimulators_tellurium.html#id2">[1]</a>

<ul>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.PreprocesssedTask.road_runner">(biosimulators_tellurium.PreprocesssedTask attribute)</a>, <a href="source/biosimulators_tellurium.html#id2">[1]</a>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.PreprocesssedTask.road_runners">(biosimulators_tellurium.PreprocesssedTask attribute)</a>, <a href="source/biosimulators_tellurium.html#id0">[1]</a>
</li>
</ul></li>
</ul></td>
Expand All @@ -501,10 +515,16 @@ <h2 id="S">S</h2>
</ul></li>
</ul></td>
<td style="width: 33%; vertical-align: top;"><ul>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.PreprocesssedTask.solver">solver (biosimulators_tellurium.data_model.PreprocesssedTask attribute)</a>, <a href="source/biosimulators_tellurium.html#id8">[1]</a>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.PreprocesssedTask.solver">solver (biosimulators_tellurium.data_model.PreprocesssedTask attribute)</a>

<ul>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.PreprocesssedTask.solver">(biosimulators_tellurium.PreprocesssedTask attribute)</a>
</li>
</ul></li>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.PreprocesssedTask.solvers">solvers (biosimulators_tellurium.data_model.PreprocesssedTask attribute)</a>

<ul>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.PreprocesssedTask.solver">(biosimulators_tellurium.PreprocesssedTask attribute)</a>, <a href="source/biosimulators_tellurium.html#id3">[1]</a>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.PreprocesssedTask.solvers">(biosimulators_tellurium.PreprocesssedTask attribute)</a>
</li>
</ul></li>
</ul></td>
Expand All @@ -525,10 +545,10 @@ <h2 id="T">T</h2>
<h2 id="V">V</h2>
<table style="width: 100%" class="indextable genindextable"><tr>
<td style="width: 33%; vertical-align: top;"><ul>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.PreprocesssedTask.variable_target_tellurium_observable_map">variable_target_tellurium_observable_map (biosimulators_tellurium.data_model.PreprocesssedTask attribute)</a>, <a href="source/biosimulators_tellurium.html#id9">[1]</a>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.PreprocesssedTask.variable_target_tellurium_observable_maps">variable_target_tellurium_observable_maps (biosimulators_tellurium.data_model.PreprocesssedTask attribute)</a>, <a href="source/biosimulators_tellurium.html#id3">[1]</a>

<ul>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.PreprocesssedTask.variable_target_tellurium_observable_map">(biosimulators_tellurium.PreprocesssedTask attribute)</a>, <a href="source/biosimulators_tellurium.html#id4">[1]</a>
<li><a href="source/biosimulators_tellurium.html#biosimulators_tellurium.PreprocesssedTask.variable_target_tellurium_observable_maps">(biosimulators_tellurium.PreprocesssedTask attribute)</a>, <a href="source/biosimulators_tellurium.html#id1">[1]</a>
</li>
</ul></li>
</ul></td>
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12 changes: 6 additions & 6 deletions docs/index.html
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<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="viewport" content="width=device-width, initial-scale=1" />

<title>BioSimulators-tellurium documentation &#8212; BioSimulators-tellurium 0.1.33 documentation</title>
<title>BioSimulators-tellurium documentation &#8212; BioSimulators-tellurium 0.1.34 documentation</title>



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<link rel="preload" as="font" type="font/woff2" crossorigin href="_static/vendor/fontawesome/6.1.2/webfonts/fa-brands-400.woff2" />
<link rel="preload" as="font" type="font/woff2" crossorigin href="_static/vendor/fontawesome/6.1.2/webfonts/fa-regular-400.woff2" />

<link rel="stylesheet" type="text/css" href="_static/pygments.css" />
<link rel="stylesheet" type="text/css" href="_static/pygments.css?v=b76e3c8a" />
<link rel="icon" sizes="16x16" type="image/png" href="https://github.com/biosimulations/biosimulations/raw/dev/libs/shared/assets/src/assets/icons/favicon-16x16.png" />
<link rel="icon" sizes="32x32" type="image/png" href="https://github.com/biosimulations/biosimulations/raw/dev/libs/shared/assets/src/assets/icons/favicon-32x32.png" />
<link rel="stylesheet" type="text/css" href="_static/css/biosimulators.css" />
<link rel="stylesheet" type="text/css" href="_static/css/biosimulators.css?v=ff938351" />

<!-- Pre-loaded scripts that we'll load fully later -->
<link rel="preload" as="script" href="_static/scripts/bootstrap.js?digest=e353d410970836974a52" />
<link rel="preload" as="script" href="_static/scripts/pydata-sphinx-theme.js?digest=e353d410970836974a52" />

<script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
<script src="_static/doctools.js"></script>
<script src="_static/sphinx_highlight.js"></script>
<script data-url_root="./" id="documentation_options" src="_static/documentation_options.js?v=f731d76b"></script>
<script src="_static/doctools.js?v=888ff710"></script>
<script src="_static/sphinx_highlight.js?v=4825356b"></script>
<script>DOCUMENTATION_OPTIONS.pagename = 'index';</script>
<link rel="author" title="About these documents" href="about.html" />
<link rel="index" title="Index" href="genindex.html" />
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12 changes: 6 additions & 6 deletions docs/installation.html
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<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="viewport" content="width=device-width, initial-scale=1" />

<title>Installation instructions &#8212; BioSimulators-tellurium 0.1.33 documentation</title>
<title>Installation instructions &#8212; BioSimulators-tellurium 0.1.34 documentation</title>



Expand All @@ -28,18 +28,18 @@
<link rel="preload" as="font" type="font/woff2" crossorigin href="_static/vendor/fontawesome/6.1.2/webfonts/fa-brands-400.woff2" />
<link rel="preload" as="font" type="font/woff2" crossorigin href="_static/vendor/fontawesome/6.1.2/webfonts/fa-regular-400.woff2" />

<link rel="stylesheet" type="text/css" href="_static/pygments.css" />
<link rel="stylesheet" type="text/css" href="_static/pygments.css?v=b76e3c8a" />
<link rel="icon" sizes="16x16" type="image/png" href="https://github.com/biosimulations/biosimulations/raw/dev/libs/shared/assets/src/assets/icons/favicon-16x16.png" />
<link rel="icon" sizes="32x32" type="image/png" href="https://github.com/biosimulations/biosimulations/raw/dev/libs/shared/assets/src/assets/icons/favicon-32x32.png" />
<link rel="stylesheet" type="text/css" href="_static/css/biosimulators.css" />
<link rel="stylesheet" type="text/css" href="_static/css/biosimulators.css?v=ff938351" />

<!-- Pre-loaded scripts that we'll load fully later -->
<link rel="preload" as="script" href="_static/scripts/bootstrap.js?digest=e353d410970836974a52" />
<link rel="preload" as="script" href="_static/scripts/pydata-sphinx-theme.js?digest=e353d410970836974a52" />

<script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
<script src="_static/doctools.js"></script>
<script src="_static/sphinx_highlight.js"></script>
<script data-url_root="./" id="documentation_options" src="_static/documentation_options.js?v=f731d76b"></script>
<script src="_static/doctools.js?v=888ff710"></script>
<script src="_static/sphinx_highlight.js?v=4825356b"></script>
<script>DOCUMENTATION_OPTIONS.pagename = 'installation';</script>
<link rel="author" title="About these documents" href="about.html" />
<link rel="index" title="Index" href="genindex.html" />
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12 changes: 6 additions & 6 deletions docs/py-modindex.html
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<head>
<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" />
<title>Python Module Index &#8212; BioSimulators-tellurium 0.1.33 documentation</title>
<title>Python Module Index &#8212; BioSimulators-tellurium 0.1.34 documentation</title>



Expand All @@ -27,18 +27,18 @@
<link rel="preload" as="font" type="font/woff2" crossorigin href="_static/vendor/fontawesome/6.1.2/webfonts/fa-brands-400.woff2" />
<link rel="preload" as="font" type="font/woff2" crossorigin href="_static/vendor/fontawesome/6.1.2/webfonts/fa-regular-400.woff2" />

<link rel="stylesheet" type="text/css" href="_static/pygments.css" />
<link rel="stylesheet" type="text/css" href="_static/pygments.css?v=b76e3c8a" />
<link rel="icon" sizes="16x16" type="image/png" href="https://github.com/biosimulations/biosimulations/raw/dev/libs/shared/assets/src/assets/icons/favicon-16x16.png" />
<link rel="icon" sizes="32x32" type="image/png" href="https://github.com/biosimulations/biosimulations/raw/dev/libs/shared/assets/src/assets/icons/favicon-32x32.png" />
<link rel="stylesheet" type="text/css" href="_static/css/biosimulators.css" />
<link rel="stylesheet" type="text/css" href="_static/css/biosimulators.css?v=ff938351" />

<!-- Pre-loaded scripts that we'll load fully later -->
<link rel="preload" as="script" href="_static/scripts/bootstrap.js?digest=e353d410970836974a52" />
<link rel="preload" as="script" href="_static/scripts/pydata-sphinx-theme.js?digest=e353d410970836974a52" />

<script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
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<script data-url_root="./" id="documentation_options" src="_static/documentation_options.js?v=f731d76b"></script>
<script src="_static/doctools.js?v=888ff710"></script>
<script src="_static/sphinx_highlight.js?v=4825356b"></script>
<script>DOCUMENTATION_OPTIONS.pagename = 'py-modindex';</script>
<link rel="author" title="About these documents" href="about.html" />
<link rel="index" title="Index" href="genindex.html" />
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