bundle transitive deps in a fatJar

build.gradle.kts

@@ -1,13 +1,12 @@
 import org.gradle.api.JavaVersion.VERSION_1_8
 
 plugins {
-  java
-  maven
+  `maven-publish`
   kotlin("jvm") version "1.4.0"
 }
 
 group = "edu.mcgill"
-version = "0.0.8"
+version = "0.0.9"
 
 repositories {
   mavenCentral()
@@ -19,27 +18,26 @@ repositories {
 
 dependencies {
   implementation(kotlin("stdlib-jdk8"))
-  testImplementation("junit", "junit", "4.13")
   val ejmlVersion = "0.39"
-  implementation("org.ejml:ejml-kotlin:$ejmlVersion")
-  implementation("org.ejml:ejml-all:$ejmlVersion")
-  implementation("guru.nidi:graphviz-kotlin:0.17.0")
+  api("org.ejml:ejml-kotlin:$ejmlVersion")
+  api("org.ejml:ejml-all:$ejmlVersion")
+  api("guru.nidi:graphviz-kotlin:0.17.0")
+  api("io.github.vovak.astminer:astminer:0.5")
+
   implementation("org.apache.commons:commons-rng-examples-sampling:1.3")
   implementation("com.github.kwebio:kweb-core:0.7.20")
   implementation("org.slf4j:slf4j-simple:1.7.30")
   implementation("com.github.breandan:tensor:master-SNAPSHOT")
-  implementation("io.github.vovak.astminer:astminer:0.5")
 
 //  val kmathVersion by extra { "0.1.4-dev-8" }
 //  implementation("scientifik:kmath-core:$kmathVersion")
 //  implementation("scientifik:kmath-ast:$kmathVersion")
 //  implementation("scientifik:kmath-prob:$kmathVersion")
 
+  testImplementation("junit", "junit", "4.13")
   testImplementation("com.github.ajalt:clikt:2.6.0")
-
   testImplementation("com.redislabs:jredisgraph:2.0.2")
   testImplementation("io.lacuna:bifurcan:0.2.0-alpha1")
-
   testImplementation("org.junit.jupiter:junit-jupiter:5.6.2")
   val jgraphtVersion by extra { "1.5.0" }
   testImplementation("org.jgrapht:jgrapht-core:$jgraphtVersion")
@@ -89,4 +87,42 @@ tasks {
     into(installPath)
     doLast { logger.info("Kaliningraph notebook support was installed in: $installPath") }
   }
+}
+
+val fatJar by tasks.creating(Jar::class) {
+  archiveBaseName.set("${project.name}-fat")
+  manifest {
+    attributes["Implementation-Title"] = "kaliningraph"
+    attributes["Implementation-Version"] = archiveVersion
+  }
+  from(configurations.runtimeClasspath.get().map { if (it.isDirectory) it else zipTree(it) })
+  with(tasks.jar.get() as CopySpec)
+}
+
+publishing {
+  publications.create<MavenPublication>("default") {
+    artifact(fatJar)
+    pom {
+      name.set("Kaliningraph")
+      url.set("https://github.com/breandan/kaliningraph")
+      licenses {
+        license {
+          name.set("The Apache Software License, Version 1.0")
+          url.set("http://www.apache.org/licenses/LICENSE-3.0.txt")
+          distribution.set("repo")
+        }
+      }
+      developers {
+        developer {
+          id.set("Breandan Considine")
+          name.set("Breandan Considine")
+          email.set("bre@ndan.co")
+          organization.set("McGill University")
+        }
+      }
+      scm {
+        url.set("https://github.com/breandan/kaliningraph")
+      }
+    }
+  }
 }

kaliningraph.json

@@ -1,29 +1,13 @@
 {
   "properties": {
-    "kaliningraphVersion": "0.0.8",
-    "graphvizVersion": "0.16.0",
-    "jgraphtVersion": "1.4.0",
-    "ejmlVersion": "0.39",
-    "mathVersion": "3.6.1",
-    "tinkerpopVersion": "3.4.6",
-    "astminerVersion": "0.5"
+    "kaliningraphVersion": "0.0.9"
   },
   "link": "https://github.com/breandan/kaliningraph",
   "repositories": [
-    "https://jitpack.io",
-    "https://dl.bintray.com/egor-bogomolov/astminer"
+    "https://jitpack.io"
   ],
   "dependencies": [
-    "com.github.breandan:kaliningraph:$kaliningraphVersion",
-    "guru.nidi:graphviz-kotlin:$graphvizVersion",
-    "org.ejml:ejml-kotlin:$ejmlVersion",
-    "org.ejml:ejml-all:$ejmlVersion",
-    "org.apache.commons:commons-math3:$mathVersion",
-    "org.jgrapht:jgrapht-core:$jgraphtVersion",
-    "org.jgrapht:jgrapht-ext:$jgraphtVersion",
-    "org.apache.tinkerpop:gremlin-core:$tinkerpopVersion",
-    "org.apache.tinkerpop:tinkergraph-gremlin:$tinkerpopVersion",
-    "io.github.vovak.astminer:astminer:$astminerVersion"
+    "com.github.breandan:kaliningraph:$kaliningraphVersion"
   ],
   "imports": [
     "edu.mcgill.kaliningraph.*",