Skip to content

Commit

Permalink
Update contributing_to_cpg.md
Browse files Browse the repository at this point in the history
  • Loading branch information
shntnu authored Jun 12, 2024
1 parent 0c3c523 commit 0a45c59
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions documentation/contributing_to_cpg.md
Original file line number Diff line number Diff line change
Expand Up @@ -16,17 +16,17 @@ Instead, please direct such questions to the respective dataset repository linke
Contributions can be in the form of complete datasets or additions to extant datasets (e.g. segmentations or deep-learning generated profiles).
Please contact @erinweisbart or @shntnu to initiate discussion of a data contribution.

For new datasets, please include in your contact:
For new datasets, please include the following details in your contact:

1) assay used (standard Cell Painting or describe the variation. If you would like to contribute data from a derivative assay it must be useable for morphological profiling in that it stains/labels multiple cellular compartments/organelles.)
2) approximate data size
3) components you wish to contribute (all are described in [data structure](https://broadinstitute.github.io/cellpainting-gallery/data_structure.html)) (major components: `images`, `analysis`, `backend`, `load_data_csv`, `profiles`. optional components: `pipelines`, `qc`, etc.). Note that `metadata` is required.
4) institutional identifier to use for data (e.g. `broad`, `anonymous`)
5) suggested top level project tag. Typically this is a 1 word summary of the project (e.g. cpg0011-lipocyteprofiler, cpg0016-jump, cpg0022-cmqtl) and sometimes also includes the last name of the first author (e.g. cpg0010-caie-drugresponse, cpg0028-kelley-resistance, cpg0031-caicedo-cmvip)

For existing datasets, please include in your contact:
For existing datasets, please the following details include in your contact:

1) top level project tag that your data corresponds to (e.g. cpg0016-jump)
1) top-level project tag that your data corresponds to (e.g. `cpg0016-jump`)
2) approximate data size
3) components you wish to contribute

Expand Down

0 comments on commit 0a45c59

Please sign in to comment.