v0.6.2

What's Changed

New Features

• Use Google Cloud Public Datasets as default source for public resources by @nawatts in #431
• Add options for reading public resources from Registry of Open Data on AWS and Azure Open Datasets by @nawatts in #430
• Allow setting the default source for public resources with an environment variable by @nawatts in #435
• Use hl.utils.guess_cloud_spark_provider to set default resources source by @nawatts in #436
• add checkpoint option to get_qc_mt by @klaricch in #437
• Modification to the annotate_sex pipeline to allow sex ploidy estimation using only variants instead of ref blocks by @jkgoodrich in #445

Other Changes

• Document selecting resource source by @nawatts in #408
• Add VEP 101 init by @jkgoodrich in #411
• Small fix to docstrings for make_freq_index_dict() by @gtiao in #412
• Tiny fix to assign_population_pcs use of known label by @jkgoodrich in #413
• Added option to get file stats for requester-pays files by @ch-kr in #414
• fix to faf description text by @jkgoodrich in #415
• Update current gnomAD GRCh38 genome release v3.1.2 by @jkgoodrich in #416
• Update to new RouterAsyncFS interface in Hail 0.2.79 by @nawatts in #425
• add vds resource by @klaricch in #423
• Modified subset_samples_and_variants() by @wlu04 in #421
• Modified compute_stratified_sample_qc() by @wlu04 in #420
• Modified annotate_sex() by @wlu04 in #427

New Contributors

• @klaricch made their first contribution in #423
• @wlu04 made their first contribution in #421

Full Changelog: v0.6.0...v0.6.2