Tests #161
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| name: Tests | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: | |
| - main | |
| schedule: | |
| - cron: '0 0 * * 1' | |
| jobs: | |
| Build: | |
| runs-on: ubuntu-latest | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - name: 'Checkout' | |
| uses: actions/checkout@v4 | |
| with: | |
| ref: ${{ github.ref }} | |
| - name: 'Deploying miniconda' | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| miniconda-version: "latest" | |
| environment-file: recipes/workflow.yaml | |
| python-version: '3.9' | |
| mamba-version: "*" | |
| channel-priority: true | |
| use-mamba: true | |
| - name: 'Build conda package' | |
| run: | | |
| conda-build recipes/ | |
| Pytest: | |
| needs: [Build] | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: [3.8, 3.9] | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - name: 'Checkout' | |
| uses: actions/checkout@v4 | |
| with: | |
| ref: ${{ github.ref }} | |
| - name: 'Deploying miniconda' | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| miniconda-version: "latest" | |
| environment-file: recipes/workflow.yaml | |
| python-version: ${{ matrix.python-version }} | |
| mamba-version: "*" | |
| channel-priority: true | |
| use-mamba: true | |
| - name: 'Run tests' | |
| run: | | |
| pip install --no-deps . | |
| python -m pytest tests/straindesign/unit | |
| python -m pytest tests/cameobrs | |
| Coverage: | |
| needs: [Build] | |
| runs-on: ubuntu-latest | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - name: 'Checkout' | |
| uses: actions/checkout@v4 | |
| with: | |
| ref: ${{ github.ref }} | |
| - name: 'Deploying miniconda' | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| miniconda-version: "latest" | |
| environment-file: recipes/workflow.yaml | |
| python-version: '3.9' | |
| mamba-version: "*" | |
| channel-priority: true | |
| use-mamba: true | |
| - name: 'Run tests' | |
| run: | | |
| pip install --no-deps . | |
| coverage run -m pytest tests/straindesign/unit | |
| coverage lcov | |
| - name: 'Coveralls' | |
| uses: coverallsapp/github-action@master | |
| with: | |
| github-token: ${{ secrets.GITHUB_TOKEN }} | |
| path-to-lcov: ./coverage.lcov |