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GSEA.txt
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GSEA.txt
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NAME SIZE ES.Runin.All NES.Runin.All NOM.p.val.Runin.All FDR.q.val.Runin.All FWER.p.val.Runin.All RANK.AT.MAX.Runin.All LEADING.EDGE.Runin.All ES.Runin.Nonzero.Tumor NES.Runin.Nonzero.Tumor NOM.p.val.Runin.Nonzero.Tumor FDR.q.val.Runin.Nonzero.Tumor FWER.p.val.Runin.Nonzero.Tumor RANK.AT.MAX.Runin.Nonzero.Tumor LEADING.EDGE.Runin.Nonzero.Tumor ES.Surgery NES.Surgery NOM.p.val.Surgery FDR.q.val.Surgery FWER.p.val.Surgery RANK.AT.MAX.Surgery LEADING.EDGE.Surgery
ERBB2_DESMEDT_UP 23 -0.7484568 -2.2744577 0 0 0 2417 tags=61%, list=12%, signal=69% -0.72921777 -2.2307072 0 0 0 3460 tags=70%, list=18%, signal=84% -0.78560466 -2.3850818 0 0 0 2652 tags=74%, list=14%, signal=85%
ESR1_DESMEDT 262 -0.48498967 -2.2830608 0 0 0 3609 tags=40%, list=18%, signal=49% -0.4813535 -2.3401299 0 0 0 4682 tags=50%, list=24%, signal=64% -0.44886416 -2.0746343 0 0.000188 0.001 2817 tags=35%, list=14%, signal=40%
GEPARSIXTO_IMMUNE 12 0.5224429 1.3371389 0.14700194 0.07036808 0.713 4431 tags=58%, list=23%, signal=75% 0.90384966 2.2225397 0 0 0 1015 tags=58%, list=5%, signal=61% -0.75503814 -1.8599334 0.002178649 0.001149065 0.007 3312 tags=50%, list=17%, signal=60%
HALLMARK_ADIPOGENESIS 188 0.4245543 1.9018419 0 0.000756 0.006 1999 tags=22%, list=10%, signal=25% 0.41583705 1.7732478 0 0.00079 0.012 2775 tags=24%, list=14%, signal=28% 0.5202018 2.0984113 0 0 0 2024 tags=24%, list=10%, signal=27%
HALLMARK_ALLOGRAFT_REJECTION 193 0.4320009 1.9680927 0 0.000188 0.001 4553 tags=46%, list=23%, signal=59% 0.5633047 2.39777 0 0 0 3575 tags=49%, list=18%, signal=60% -0.3101025 -1.381072 0.009933775 0.037880924 0.405 4742 tags=35%, list=24%, signal=46%
HALLMARK_ANDROGEN_RESPONSE 98 -0.28917015 -1.1835967 0.14884695 0.1735075 0.967 2360 tags=22%, list=12%, signal=25% 0.29187512 1.1453917 0.20336391 0.2501566 1 4222 tags=34%, list=22%, signal=43% 0.28493482 1.0513166 0.35876623 0.3705469 1 1246 tags=15%, list=6%, signal=16%
HALLMARK_ANGIOGENESIS 35 0.6250839 2.091569 0 0 0 1813 tags=37%, list=9%, signal=41% 0.63607013 2.0415013 0 0 0 1866 tags=37%, list=10%, signal=41% 0.40940025 1.2488521 0.15666667 0.14183365 0.955 1595 tags=26%, list=8%, signal=28%
HALLMARK_APOPTOSIS 160 0.27103722 1.1819026 0.12154696 0.19609231 0.982 2487 tags=21%, list=13%, signal=23% 0.2782055 1.152719 0.17171717 0.2492358 1 4688 tags=35%, list=24%, signal=46% 0.34682584 1.3976921 0.014684288 0.050239656 0.61 1506 tags=18%, list=8%, signal=19%
HALLMARK_COAGULATION 138 0.40681374 1.7523677 0 0.002795043 0.027 3487 tags=38%, list=18%, signal=45% 0.43628895 1.7635523 0 0.000992 0.016 2154 tags=29%, list=11%, signal=32% 0.38649473 1.530294 0.004405286 0.02159045 0.233 2024 tags=25%, list=10%, signal=27%
HALLMARK_COMPLEMENT 196 0.3548164 1.6137862 0 0.009882059 0.099 3219 tags=31%, list=16%, signal=37% 0.44500893 1.8961359 0 0 0 3750 tags=39%, list=19%, signal=47% 0.26045838 1.0548135 0.32846716 0.38035414 1 2209 tags=18%, list=11%, signal=20%
HALLMARK_DNA_REPAIR 146 -0.3874811 -1.6930431 0 0.003278395 0.044 4226 tags=34%, list=22%, signal=43% -0.3496786 -1.5701574 0 0.012584771 0.117 1828 tags=21%, list=9%, signal=23% -0.3917871 -1.681333 0 0.003981942 0.038 5386 tags=42%, list=27%, signal=57%
HALLMARK_E2F_TARGETS 177 -0.7256952 -3.2702777 0 0 0 2305 tags=58%, list=12%, signal=65% -0.72523093 -3.369128 0 0 0 1707 tags=51%, list=9%, signal=56% -0.7036051 -3.0748935 0 0 0 2761 tags=59%, list=14%, signal=68%
HALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITION 194 0.5234536 2.3259869 0 0 0 1822 tags=38%, list=9%, signal=42% 0.5574975 2.371934 0 0 0 2875 tags=46%, list=15%, signal=54% 0.39355105 1.5977528 0 0.012039652 0.121 1978 tags=27%, list=10%, signal=30%
HALLMARK_ESTROGEN_RESPONSE_EARLY 186 -0.3080755 -1.4039346 0.008196721 0.03639445 0.491 2217 tags=24%, list=11%, signal=27% -0.24545087 -1.1467477 0.110749185 0.20300746 0.938 3059 tags=27%, list=16%, signal=32% 0.31701416 1.2905438 0.06140351 0.11581436 0.898 2189 tags=20%, list=11%, signal=22%
HALLMARK_ESTROGEN_RESPONSE_LATE 196 -0.42147693 -1.9118497 0 8.33e-05 0.001 2329 tags=32%, list=12%, signal=36% -0.36548254 -1.7221541 0 0.002765428 0.023 2557 tags=31%, list=13%, signal=35% -0.33379042 -1.4853238 0 0.018366883 0.193 2201 tags=28%, list=11%, signal=31%
HALLMARK_FATTY_ACID_METABOLISM 154 0.245448 1.0750084 0.26654065 0.355336 1 3033 tags=18%, list=15%, signal=21% 0.31765768 1.3264574 0.047419805 0.07384019 0.817 3957 tags=27%, list=20%, signal=34% 0.3211579 1.2614408 0.07994186 0.13713361 0.947 3602 tags=23%, list=18%, signal=28%
HALLMARK_G2M_CHECKPOINT 181 -0.6956448 -3.1529932 0 0 0 1832 tags=50%, list=9%, signal=55% -0.688788 -3.2018554 0 0 0 2730 tags=56%, list=14%, signal=64% -0.65580773 -2.8849473 0 0 0 2220 tags=50%, list=11%, signal=56%
HALLMARK_GLYCOLYSIS 190 -0.43537787 -1.976889 0 0 0 4161 tags=42%, list=21%, signal=52% -0.35043263 -1.6141888 0 0.008606367 0.076 3329 tags=29%, list=17%, signal=35% -0.38365704 -1.7187933 0 0.003162588 0.029 4196 tags=42%, list=21%, signal=52%
HALLMARK_HEDGEHOG_SIGNALING 36 0.39013347 1.332395 0.0910816 0.068807214 0.724 5985 tags=53%, list=30%, signal=76% 0.41694546 1.3434252 0.08280255 0.06708118 0.769 4423 tags=44%, list=23%, signal=57% 0.54003185 1.6926104 0.009983361 0.006533555 0.051 4302 tags=50%, list=22%, signal=64%
HALLMARK_HYPOXIA 189 0.34816468 1.5710901 0 0.013670757 0.146 2980 tags=26%, list=15%, signal=31% 0.42158684 1.7749801 0 0.000855 0.012 4063 tags=39%, list=21%, signal=49% 0.5176161 2.105988 0 0 0 2401 tags=33%, list=12%, signal=37%
HALLMARK_IL2_STAT5_SIGNALING 184 0.31794968 1.4184325 0.010968922 0.04004084 0.441 4516 tags=38%, list=23%, signal=48% 0.37649888 1.5858239 0 0.007725613 0.135 2659 tags=28%, list=14%, signal=32% 0.30281007 1.2125993 0.09742121 0.1744956 0.982 2413 tags=20%, list=12%, signal=22%
HALLMARK_IL6_JAK_STAT3_SIGNALING 86 0.3808863 1.5133567 0.016605167 0.019848187 0.231 4553 tags=43%, list=23%, signal=56% 0.47004458 1.7521398 0 0.001278522 0.022 5031 tags=51%, list=26%, signal=68% 0.3204153 1.176286 0.19689922 0.20124972 0.997 1951 tags=19%, list=10%, signal=21%
HALLMARK_INFLAMMATORY_RESPONSE 194 0.34325245 1.5599405 0 0.013953244 0.159 4650 tags=39%, list=24%, signal=51% 0.43183374 1.8539132 0 0.000234 0.003 4121 tags=39%, list=21%, signal=48% 0.29083598 1.1875627 0.09243698 0.19753239 0.995 4189 tags=28%, list=21%, signal=35%
HALLMARK_INTERFERON_ALPHA_RESPONSE 90 -0.2449225 -0.99147636 0.47401246 0.49555418 1 4944 tags=36%, list=25%, signal=47% -0.2810241 -1.1670724 0.14714715 0.18810028 0.909 4161 tags=34%, list=21%, signal=44% -0.5928709 -2.3708296 0 0 0 3030 tags=52%, list=15%, signal=61%
HALLMARK_INTERFERON_GAMMA_RESPONSE 188 0.2751018 1.2375067 0.0569395 0.13748218 0.938 4911 tags=36%, list=25%, signal=48% 0.35331082 1.4981987 0 0.015822759 0.274 3562 tags=32%, list=18%, signal=39% -0.39053416 -1.7613138 0 0.002474881 0.019 3351 tags=39%, list=17%, signal=46%
HALLMARK_KRAS_SIGNALING_DN 186 0.24056233 1.0766065 0.28070176 0.3684485 1 3382 tags=24%, list=17%, signal=29% 0.2599834 1.0969665 0.25409836 0.30696815 1 1801 tags=15%, list=9%, signal=16% 0.34938052 1.4116656 0.007278021 0.04737941 0.567 3881 tags=31%, list=20%, signal=38%
HALLMARK_KRAS_SIGNALING_UP 192 0.4289136 1.9228938 0 0.000579 0.004 3646 tags=39%, list=19%, signal=47% 0.5157218 2.1857598 0 0 0 3562 tags=45%, list=18%, signal=54% 0.43373725 1.7764581 0 0.003089926 0.021 2847 tags=29%, list=15%, signal=34%
HALLMARK_MITOTIC_SPINDLE 185 -0.46351972 -2.111398 0 0 0 1737 tags=22%, list=9%, signal=23% -0.4482467 -2.0888748 0 0 0 2192 tags=24%, list=11%, signal=27% -0.41323364 -1.8185966 0 0.002080436 0.013 2071 tags=22%, list=11%, signal=25%
HALLMARK_MTORC1_SIGNALING 192 -0.5400547 -2.4662411 0 0 0 2936 tags=43%, list=15%, signal=50% -0.47617498 -2.218732 0 0 0 2064 tags=34%, list=11%, signal=37% -0.5523759 -2.4389687 0 0 0 3211 tags=46%, list=16%, signal=54%
HALLMARK_MYC_TARGETS_V1 178 -0.6278176 -2.8420289 0 0 0 4140 tags=57%, list=21%, signal=72% -0.55811316 -2.5962112 0 0 0 4033 tags=47%, list=21%, signal=58% -0.5181981 -2.2761323 0 0 0 4079 tags=49%, list=21%, signal=62%
HALLMARK_MYC_TARGETS_V2 50 -0.5931886 -2.1829038 0 0 0 5305 tags=56%, list=27%, signal=77% -0.60285246 -2.2496777 0 0 0 4821 tags=58%, list=25%, signal=77% -0.42977604 -1.5568689 0.009975063 0.010849165 0.108 1480 tags=22%, list=8%, signal=24%
HALLMARK_NOTCH_SIGNALING 30 -0.20697229 -0.66848767 0.92871284 0.9811609 1 4917 tags=37%, list=25%, signal=49% 0.2100631 0.6508447 0.95068026 0.9848712 1 2045 tags=13%, list=10%, signal=15% 0.33081073 1.0010742 0.4696707 0.45426077 1 3566 tags=30%, list=18%, signal=37%
HALLMARK_OXIDATIVE_PHOSPHORYLATION 195 -0.3647845 -1.6758721 0 0.003445515 0.05 3982 tags=33%, list=20%, signal=41% -0.3109881 -1.4487016 0.003424658 0.027500235 0.268 5809 tags=46%, list=30%, signal=64% -0.25154182 -1.127038 0.13937283 0.21410416 0.967 5887 tags=42%, list=30%, signal=59%
HALLMARK_P53_PATHWAY 184 0.20893691 0.9329932 0.6309751 0.6385875 1 3900 tags=24%, list=20%, signal=30% 0.24076582 1.0100951 0.44630405 0.47264948 1 5414 tags=35%, list=28%, signal=48% 0.3733942 1.5050822 0.002919708 0.021772264 0.279 2413 tags=23%, list=12%, signal=26%
HALLMARK_PI3K_AKT_MTOR_SIGNALING 100 -0.35625717 -1.4759287 0.008547009 0.022075735 0.295 3889 tags=30%, list=20%, signal=37% -0.2981199 -1.2892867 0.0625 0.082939036 0.637 1987 tags=18%, list=10%, signal=20% -0.38272643 -1.5245354 0 0.013941551 0.142 5699 tags=48%, list=29%, signal=67%
HALLMARK_PROTEIN_SECRETION 89 -0.34636375 -1.4172709 0.021276595 0.034267887 0.45 4587 tags=40%, list=23%, signal=53% -0.2437325 -1.0160377 0.39889196 0.43469048 1 3084 tags=25%, list=16%, signal=29% -0.33813447 -1.3508579 0.04054054 0.045247696 0.478 5363 tags=47%, list=27%, signal=65%
HALLMARK_REACTIVE_OXIGEN_SPECIES_PATHWAY 47 -0.2764769 -0.9916988 0.45322245 0.52114046 1 4392 tags=40%, list=22%, signal=52% -0.26050448 -0.9609764 0.48963732 0.5506004 1 4023 tags=34%, list=20%, signal=43% -0.3102838 -1.1061449 0.2931507 0.23801628 0.982 3031 tags=34%, list=15%, signal=40%
HALLMARK_TGF_BETA_SIGNALING 51 0.21261038 0.7852016 0.8612167 0.9104085 1 3011 tags=18%, list=15%, signal=21% 0.19959046 0.6887287 0.93874174 1 1 2878 tags=14%, list=15%, signal=16% 0.32542503 1.070295 0.35927153 0.36798242 1 5101 tags=41%, list=26%, signal=55%
HALLMARK_TNFA_SIGNALING_VIA_NFKB 188 0.21899365 0.9869929 0.50628364 0.5234781 1 4553 tags=30%, list=23%, signal=38% 0.26079148 1.0985763 0.26359832 0.31684056 1 4643 tags=32%, list=24%, signal=42% 0.60018575 2.4208965 0 0 0 2193 tags=38%, list=11%, signal=42%
HALLMARK_UNFOLDED_PROTEIN_RESPONSE 109 -0.4639225 -1.9395143 0 0 0 3954 tags=39%, list=20%, signal=49% -0.38770384 -1.6416837 0 0.006837172 0.059 3663 tags=33%, list=19%, signal=40% -0.42795998 -1.7599778 0 0.002284505 0.019 4882 tags=50%, list=25%, signal=67%
HALLMARK_WNT_BETA_CATENIN_SIGNALING 40 0.30472434 1.0572293 0.37078652 0.376871 1 5535 tags=48%, list=28%, signal=66% 0.37028298 1.2419102 0.15609756 0.13734864 0.966 4182 tags=40%, list=21%, signal=51% 0.47013098 1.5206019 0.035958905 0.020922178 0.249 1595 tags=28%, list=8%, signal=30%
IMMUNE_ESTIMATE 140 0.6511294 2.8310554 0 0 0 4158 tags=72%, list=21%, signal=91% 0.7458177 3.0437949 0 0 0 2677 tags=73%, list=14%, signal=84% -0.30689594 -1.3288012 0.02153846 0.051313877 0.536 5327 tags=43%, list=27%, signal=58%
N9831_IMMUNE 13 0.7616514 1.9598379 0 0.000161 0.001 2067 tags=54%, list=11%, signal=60% 0.7896391 2.0311701 0 0 0 2760 tags=69%, list=14%, signal=81% 0.75550145 1.8643981 0 0.000525 0.003 3180 tags=62%, list=16%, signal=73%
PAM50_PROLIF 11 -0.94783264 -2.3238688 0 0 0 280 tags=91%, list=1%, signal=92% -0.94868004 -2.4070036 0 0 0 1019 tags=100%, list=5%, signal=105% -0.955662 -2.3284917 0 0 0 882 tags=100%, list=4%, signal=105%
STROMAL_DESMEDT 68 0.3570213 1.364576 0.048732944 0.05888602 0.615 4547 tags=41%, list=23%, signal=53% 0.42702305 1.5677584 0.007656968 0.00891771 0.161 2323 tags=29%, list=12%, signal=33% -0.37571242 -1.4382083 0.027472528 0.024641473 0.262 3308 tags=35%, list=17%, signal=42%
STROMAL_ESTIMATE 140 0.71079224 3.0751882 0 0 0 3201 tags=69%, list=16%, signal=82% 0.76308364 3.1273222 0 0 0 2762 tags=72%, list=14%, signal=83% 0.422221 1.6435772 0.001453488 0.010059808 0.088 1910 tags=31%, list=10%, signal=35%
STROMAL_FARMER 48 0.76597834 2.7476106 0 0 0 1579 tags=65%, list=8%, signal=70% 0.8100854 2.7284656 0 0 0 1487 tags=71%, list=8%, signal=76% -0.50885904 -1.8090963 0.0025 0.002027669 0.014 1473 tags=38%, list=8%, signal=40%