Skip to content

Python package for compressing floating-point PyTorch tensors

License

Notifications You must be signed in to change notification settings

catid/cuda_float_compress

Repository files navigation

cuda_float_compress

Python package for compressing floating-point PyTorch tensors. Accepts 1D float32 tensors on CPU or GPU for compression. Returns 1D float32 tensors on GPU for decompression. Works best for arrays larger than 32K floats.

Provides a fast (GPU-accelerated) compression algorithm to speed up the transmission of PyTorch model parameters, gradients, and other network data while training machine learning models.

This library has a guaranteed maximum error bound for the decompressed data.

Please read the src/cuszplus_f32.cu file for details on the compression algorithm, which is a fairly simple CUDA kernel used to prepare data for further compression on CPU using Zstd's fastest compression mode.

Released under BSD 3-Clause License for unrestricted use in commercial and open-source software.

Prerequisites

This requires CUDA Toolkit and CMake. On Ubuntu you can install them with:

sudo apt install cuda cuda-toolkit cmake build-essential

Make sure that nvidia-smi shows your GPU as being usable. You may need to reboot.

Also make sure that you can run nvcc --version and get something like this:

nvcc: NVIDIA (R) Cuda compiler driver
Copyright (c) 2005-2024 NVIDIA Corporation
Built on Thu_Mar_28_02:18:24_PDT_2024
Cuda compilation tools, release 12.4, V12.4.131
Build cuda_12.4.r12.4/compiler.34097967_0

If you see an nvcc not found error, you should be able to fix it by typing this command:

export PATH=/usr/local/cuda/bin:$PATH

Adding this line to the end of your .bashrc or .zshrc file will make it permanent.

Basic Example

Add the cuda_float_compress package to your Python environment.

# Install the `cuda_float_compress` package from PyPI
pip install -U cuda_float_compress

Then you can use this minimal example to verify that it works (available in examples/minimal_example.py):

import torch
import numpy as np
import cuda_float_compress

cuda_device = torch.device("cuda")

# Generate some random data
original_data = torch.tensor(np.random.normal(0, 1, 32 * 1024), dtype=torch.float32, device=cuda_device)

# Compress the data, specifying the maximum error bound
max_error = 0.0001
compressed_data = cuda_float_compress.cuszplus_compress(original_data, max_error)

# --- Send the data over the network here ---

# Decompress the data
decompressed_data = cuda_float_compress.cuszplus_decompress(compressed_data, cuda_device)

# Verify that the decompressed data is the same as the original data
assert torch.allclose(original_data, decompressed_data, atol=max_error)
print(f"Works! Compression Ratio: {original_data.numel() * 4.0 / compressed_data.numel():.2f}")

This requires that you pip install torch and numpy first.

Manual Installation

These instructions require you have installed Conda.

git clone https://github.com/catid/cuda_float_compress
cd cuda_float_compress
git submodule update --init --recursive

conda create -n cfc python=3.10 -y && conda activate cfc

# Install dependencies.  Right now this is just torch and numpy.
pip install -r requirements.txt

pip install .

Testing

After installing the package, you can run the example script (from the root directory of the project).

conda activate cfc

python examples/basic_example.py

# Install torchvision and pyzfp to test the model_compress_example.py script
pip install torchvision pyzfp
python examples/model_compress_example.py

Benchmarks

This is the result of running the examples/model_compress_example.py script on a consumer gaming PC with an Intel i9-12900K CPU and NVIDIA GeForce RTX 4090 (24GB) with CUDA 12.4:

(cfc) ➜  cuda_float_compress git:(main) ✗ python examples/model_compress_example.py
/home/catid/mambaforge/envs/cfc/lib/python3.10/site-packages/torchvision/models/_utils.py:208: UserWarning: The parameter 'pretrained' is deprecated since 0.13 and may be removed in the future, please use 'weights' instead.
  warnings.warn(
/home/catid/mambaforge/envs/cfc/lib/python3.10/site-packages/torchvision/models/_utils.py:223: UserWarning: Arguments other than a weight enum or `None` for 'weights' are deprecated since 0.13 and may be removed in the future. The current behavior is equivalent to passing `weights=RegNet_Y_32GF_Weights.IMAGENET1K_V1`. You can also use `weights=RegNet_Y_32GF_Weights.DEFAULT` to get the most up-to-date weights.
  warnings.warn(msg)
original_params.shape: torch.Size([145046770])
compressed_params = torch.Size([144257393]) torch.uint8 cpu
stem.0.weight = torch.Size([32, 3, 3, 3]) torch.float32 cuda:0
    MSE: 3.46646800153394e-09 Max Error: 0.00010001659393310547
stem.1.weight = torch.Size([32]) torch.float32 cuda:0
    MSE: 3.1061571093005114e-09 Max Error: 9.965896606445312e-05

...

trunk_output.block4.block4-0.f.c.1.bias = torch.Size([3712]) torch.float32 cuda:0
    MSE: 3.3526341702838636e-09 Max Error: 9.996816515922546e-05
trunk_output.block4.block4-0.f.c.1.running_mean = torch.Size([3712]) torch.float32 cuda:0
    MSE: 0.0 Max Error: 0.0
trunk_output.block4.block4-0.f.c.1.running_var = torch.Size([3712]) torch.float32 cuda:0
    MSE: 0.0 Max Error: 0.0
fc.weight = torch.Size([1000, 3712]) torch.float32 cuda:0
    MSE: 3.333001874494812e-09 Max Error: 0.00010001659393310547
fc.bias = torch.Size([1000]) torch.float32 cuda:0
    MSE: 3.3378397823469186e-09 Max Error: 9.982381016016006e-05
Overall Compression Ratio: 4.02
Time to compress params: 0.40 s
Time to decompress params: 0.32 s

pyzfp Compression Ratio: 2.54
pyzfp Compression Time: 0.40 s

Terminology:

  • Max error = Maximum error in Original_i - Decompressed_i values.
  • MSE = Mean Squared Error = Mean{ (Original_i - Decompressed_i)^2 }

On this 145M parameter model, it achieves a 4:1 compression ratio, matching the performance of 8-bit quantization with guaranteed accuracy of 0.0001 per parameter.

It seems to take about 0.5 seconds per 150M parameters to compress, and a little faster to decompress. So about 1.5GBPS.

You can also see that pyzfp runs about the same speed as this Python package, but the compression ratio is much lower for machine learning models. So for what I'm working on right now, cuda_float_compress is a better choice.

Discussion

If the data to compress has other features like low-rank structure, then applying SVD (Singular Value Decomposition) to the data before compression can be helpful. An example of using SVD for compression is here. This Python package does not implement SVD, but it is compatible with it.

Some quantization approaches, such as the one described here, accumulate the error in transmitted parameters and add the error back into the next communication round to compensate for the quantization error. This Python package does not implement this idea, but it is compatible with it.

Limitations and Future Work

If your network link is faster than 10Gbps, then it may not be an improvement over just sending the file uncompressed since it compresses at about 12 Gbps. So, it's well-suited for most kinds of Internet transfers, but maybe less useful to send data between servers that are connected via 100G+ InfiniBand or some other supercomputer-class switched network. I'm personally planning to use this for distributed training on the Internet, so it's a better option for me than a faster CUDA-only approach that gets a worse compression ratio.

Currently it only works for float32 tensors. I'd like to add support for FP16 once I start actually using this in my training scripts. Also it would make sense to add functionality to compress PyTorch model parameters of other types too like UINT64. For more general use-cases it would make sense to add a CPU version of the algorithm (one is provided in the cpu_compress_test/ folder).

Acknowledgements

I was inspired to work on this project by trying to fix bugs in the cuSZp project to use it for distributed ML training. Thanks for sharing your work!

Based on the Facebook Zstd project: https://github.com/facebook/zstd

Uses pybind11 for PyTorch tensor features: https://github.com/pybind/pybind11

About

Python package for compressing floating-point PyTorch tensors

Resources

License

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published