- D-BSSE admins need to add user to group owning the shares (e.g.:
BSSE-Beerenwinkel-Euler
) - check cluster shares with
my_share_info
(or listing member of a share, e.g.:bugroup es_beere
)
-
~/.bashrc
addumask 0007
-
~/.screenrc
for a more comfortable screen terminal multiplexing experience. -
~/.netrc
MUST NOT be LDAP passwords of regular users -
~/.ssh/config
controls various parameters of SSH connection.- ControlMaster MUST NOT be enabled (otherwise part of the parallelism gains are lost)
- Hosts:
bs-bewi08.ethz.ch
: specify the@d
domain-suffix for D-BSSE
-
~/.ssh/authorized_keys
- operators
- forced commands
batman.sh
subcommands for remote bs-bewi08 calls, both directly and from belfry dispatcher (2 different user keys)
-
~/rsyncd.secrets
MUST NOT be LDAP password, MUST be in sync with rsyncd.pass.euler -
~/rsyncd.conf
- symlink to the conf file
~/log
: used to store logs~/log/rotate
: symlink to log rotate script~/log/rotate.conf
: symlink to log rotate conf
Notes:
- most of the environments will be auto-magically handled by snakemake using mamba
- the conda installation is system-wide in
/cluster/project/pangolin
and already done by thequick_install.sh
installer - custom environment from
conda-qa.yaml
already installed there