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include cutoff in test
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@cbielow
cbielow committed Nov 23, 2023
1 parent 3640aef commit 0fef39e
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Showing 2 changed files with 19 additions and 19 deletions.
2 changes: 1 addition & 1 deletion src/tests/topp/CMakeLists.txt
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Expand Up @@ -1927,7 +1927,7 @@ if(WITH_GUI)
add_test("TOPP_Resampler_1_out1" ${DIFF} -whitelist ${INDEX_WHITELIST} -in1 Resampler.mzML -in2 ${DATA_DIR_TOPP}/Resampler_1_output.mzML )
set_tests_properties("TOPP_Resampler_1_out1" PROPERTIES DEPENDS "TOPP_Resampler_1")

add_test("TOPP_Resampler_2" ${TOPP_BIN_PATH}/Resampler -test -in ${DATA_DIR_TOPP}/Resampler_1_input.mzML -out Resampler2_ppm.mzML -ppm -sampling_rate 2000)
add_test("TOPP_Resampler_2" ${TOPP_BIN_PATH}/Resampler -test -in ${DATA_DIR_TOPP}/Resampler_1_input.mzML -out Resampler2_ppm.mzML -ppm -sampling_rate 2000 -min_int_cutoff 3900)
add_test("TOPP_Resampler_2_out1" ${DIFF} -whitelist ${INDEX_WHITELIST} -in1 Resampler2_ppm.mzML -in2 ${DATA_DIR_TOPP}/Resampler_2_output.mzML )
set_tests_properties("TOPP_Resampler_2_out1" PROPERTIES DEPENDS "TOPP_Resampler_2")
endif()
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36 changes: 18 additions & 18 deletions src/tests/topp/Resampler_2_output.mzML
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Original file line number Diff line number Diff line change
Expand Up @@ -83,7 +83,7 @@
</dataProcessingList>
<run id="ru_0" defaultInstrumentConfigurationRef="ic_0" sampleRef="sa_0">
<spectrumList count="3" defaultDataProcessingRef="dp_sp_0">
<spectrum id="spectrum=1" index="0" defaultArrayLength="7" dataProcessingRef="dp_sp_0">
<spectrum id="spectrum=1" index="0" defaultArrayLength="4" dataProcessingRef="dp_sp_0">
<cvParam cvRef="MS" accession="MS:1000525" name="spectrum representation" />
<cvParam cvRef="MS" accession="MS:1000511" name="ms level" value="1" />
<cvParam cvRef="MS" accession="MS:1000294" name="mass spectrum" />
Expand All @@ -94,21 +94,21 @@
</scan>
</scanList>
<binaryDataArrayList count="2">
<binaryDataArray encodedLength="76">
<binaryDataArray encodedLength="44">
<cvParam cvRef="MS" accession="MS:1000514" name="m/z array" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" />
<cvParam cvRef="MS" accession="MS:1000523" name="64-bit float" />
<cvParam cvRef="MS" accession="MS:1000576" name="no compression" />
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</binaryDataArray>
<binaryDataArray encodedLength="40">
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<cvParam cvRef="MS" accession="MS:1000515" name="intensity array" unitAccession="MS:1000131" unitName="number of detector counts" unitCvRef="MS"/>
<cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" />
<cvParam cvRef="MS" accession="MS:1000576" name="no compression" />
<binary>WOdKRFBrZUSDeA9GT5xMRy+it0Z593VFbFtTRQ==</binary>
<binary>g3gPRk+cTEcvordGefd1RQ==</binary>
</binaryDataArray>
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</spectrum>
<spectrum id="spectrum=2" index="1" defaultArrayLength="7">
<spectrum id="spectrum=2" index="1" defaultArrayLength="4">
<cvParam cvRef="MS" accession="MS:1000525" name="spectrum representation" />
<cvParam cvRef="MS" accession="MS:1000511" name="ms level" value="1" />
<cvParam cvRef="MS" accession="MS:1000294" name="mass spectrum" />
Expand All @@ -119,21 +119,21 @@
</scan>
</scanList>
<binaryDataArrayList count="2">
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<binaryDataArray encodedLength="44">
<cvParam cvRef="MS" accession="MS:1000514" name="m/z array" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" />
<cvParam cvRef="MS" accession="MS:1000523" name="64-bit float" />
<cvParam cvRef="MS" accession="MS:1000576" name="no compression" />
<binary>AAAAAAAgjUD0/dR46S6NQIusNZTaPY1A+sUKVtNMjUDWBD/C01uNQBolv9zbao1ALeV5qet5jUA=</binary>
<binary>i6w1lNo9jUD6xQpW00yNQNYEP8LTW41AGiW/3NtqjUA=</binary>
</binaryDataArray>
<binaryDataArray encodedLength="40">
<binaryDataArray encodedLength="24">
<cvParam cvRef="MS" accession="MS:1000515" name="intensity array" unitAccession="MS:1000131" unitName="number of detector counts" unitCvRef="MS"/>
<cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" />
<cvParam cvRef="MS" accession="MS:1000576" name="no compression" />
<binary>WOdKRFBrZUSDeA9GT5xMRy+it0Z593VFbFtTRQ==</binary>
<binary>g3gPRk+cTEcvordGefd1RQ==</binary>
</binaryDataArray>
</binaryDataArrayList>
</spectrum>
<spectrum id="spectrum=3" index="2" defaultArrayLength="7">
<spectrum id="spectrum=3" index="2" defaultArrayLength="4">
<cvParam cvRef="MS" accession="MS:1000525" name="spectrum representation" />
<cvParam cvRef="MS" accession="MS:1000511" name="ms level" value="2" />
<cvParam cvRef="MS" accession="MS:1000294" name="mass spectrum" />
Expand All @@ -160,17 +160,17 @@
</precursor>
</precursorList>
<binaryDataArrayList count="2">
<binaryDataArray encodedLength="76">
<binaryDataArray encodedLength="44">
<cvParam cvRef="MS" accession="MS:1000514" name="m/z array" unitAccession="MS:1000040" unitName="m/z" unitCvRef="MS" />
<cvParam cvRef="MS" accession="MS:1000523" name="64-bit float" />
<cvParam cvRef="MS" accession="MS:1000576" name="no compression" />
<binary>AAAAAAAgjUD0/dR46S6NQIusNZTaPY1A+sUKVtNMjUDWBD/C01uNQBolv9zbao1ALeV5qet5jUA=</binary>
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<cvParam cvRef="MS" accession="MS:1000515" name="intensity array" unitAccession="MS:1000131" unitName="number of detector counts" unitCvRef="MS"/>
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<binary>WOdKRFBrZUSDeA9GT5xMRy+it0Z593VFbFtTRQ==</binary>
<binary>g3gPRk+cTEcvordGefd1RQ==</binary>
</binaryDataArray>
</binaryDataArrayList>
</spectrum>
Expand All @@ -180,10 +180,10 @@
<indexList count="1">
<index name="spectrum">
<offset idRef="spectrum=1">5378</offset>
<offset idRef="spectrum=2">6933</offset>
<offset idRef="spectrum=3">8460</offset>
<offset idRef="spectrum=2">6885</offset>
<offset idRef="spectrum=3">8364</offset>
</index>
</indexList>
<indexListOffset>10848</indexListOffset>
<indexListOffset>10704</indexListOffset>
<fileChecksum>0</fileChecksum>
</indexedmzML>

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