-
Notifications
You must be signed in to change notification settings - Fork 4
/
environment.yml
405 lines (405 loc) · 13.5 KB
/
environment.yml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
name: annotate_my_genomes
channels:
- anaconda
- conda-forge
- bioconda
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=1_gnu
- _r-mutex=1.0.1=anacondar_1
- argtable2=2.13=h14c3975_1001
- atk-1.0=2.36.0=h3371d22_4
- bedtools=2.30.0=h468198e_3
- binutils_impl_linux-64=2.36.1=h193b22a_2
- binutils_linux-64=2.36=hf3e587d_7
- bioconductor-seqlogo=1.60.0=r41hdfd78af_0
- bwidget=1.9.14=ha770c72_1
- bzip2=1.0.8=h7f98852_4
- c-ares=1.18.1=h7f98852_0
- ca-certificates=2020.10.14=0
- cairo=1.16.0=ha12eb4b_1010
- certifi=2020.6.20=py36_0
- clustalo=1.2.4=h87f3376_5
- coreutils=9.0=h7f98852_0
- curl=7.82.0=h7bff187_0
- emboss=6.6.0=h5a44aac_5
- expat=2.4.7=h27087fc_0
- fasta_ushuffle=0.2=hec16e2b_4
- feelnc=0.2=pl526_0
- font-ttf-dejavu-sans-mono=2.37=hab24e00_0
- font-ttf-inconsolata=3.000=h77eed37_0
- font-ttf-source-code-pro=2.038=h77eed37_0
- font-ttf-ubuntu=0.83=hab24e00_0
- fontconfig=2.13.96=h8e229c2_2
- fonts-conda-ecosystem=1=0
- fonts-conda-forge=1=0
- freetype=2.10.4=h0708190_1
- fribidi=1.0.10=h36c2ea0_0
- gawk=5.1.0=h7b6447c_0
- gcc_impl_linux-64=9.4.0=h03d3576_13
- gcc_linux-64=9.4.0=h391b98a_7
- gdk-pixbuf=2.42.6=h04a7f16_0
- gettext=0.19.8.1=h73d1719_1008
- gffcompare=0.11.2=h9f5acd7_3
- gffread=0.12.7=hd03093a_1
- gfortran_impl_linux-64=9.4.0=h0003116_13
- gfortran_linux-64=9.4.0=hf0ab688_7
- giflib=5.2.1=h36c2ea0_2
- gmap=2021.08.25=pl5262h36cd882_0
- graphite2=1.3.13=h58526e2_1001
- graphviz=3.0.0=h5abf519_0
- gsl=2.7=he838d99_0
- gtk2=2.24.33=h90689f9_2
- gts=0.7.6=h64030ff_2
- gxx_impl_linux-64=9.4.0=h03d3576_13
- gxx_linux-64=9.4.0=h0316aca_7
- harfbuzz=3.4.0=hb4a5f5f_0
- htslib=1.14=h9753748_2
- icu=69.1=h9c3ff4c_0
- jbig=2.1=h7f98852_2003
- jpeg=9e=h7f98852_0
- k8=0.2.5=hd03093a_2
- kernel-headers_linux-64=2.6.32=he073ed8_15
- keyutils=1.6.1=h166bdaf_0
- kmerinshort=1.0.1=0
- krb5=1.19.2=h3790be6_4
- ld_impl_linux-64=2.36.1=hea4e1c9_2
- lerc=3.0=h9c3ff4c_0
- libblas=3.9.0=13_linux64_openblas
- libcblas=3.9.0=13_linux64_openblas
- libcurl=7.82.0=h7bff187_0
- libdb=6.2.32=h9c3ff4c_0
- libdeflate=1.10=h7f98852_0
- libedit=3.1.20191231=he28a2e2_2
- libev=4.33=h516909a_1
- libffi=3.4.2=h7f98852_5
- libgcc=7.2.0=h69d50b8_2
- libgcc-devel_linux-64=9.4.0=hd854feb_13
- libgcc-ng=11.2.0=h1d223b6_13
- libgd=2.3.3=h283352f_2
- libgfortran-ng=11.2.0=h69a702a_13
- libgfortran5=11.2.0=h5c6108e_13
- libglib=2.70.2=h174f98d_4
- libgomp=11.2.0=h1d223b6_13
- libiconv=1.16=h516909a_0
- liblapack=3.9.0=13_linux64_openblas
- libnghttp2=1.47.0=h727a467_0
- libnsl=2.0.0=h7f98852_0
- libopenblas=0.3.18=pthreads_h8fe5266_0
- libpng=1.6.37=h21135ba_2
- librsvg=2.52.5=h0a9e6e8_2
- libsanitizer=9.4.0=h79bfe98_13
- libssh2=1.10.0=ha56f1ee_2
- libstdcxx-devel_linux-64=9.4.0=hd854feb_13
- libstdcxx-ng=11.2.0=he4da1e4_13
- libtiff=4.3.0=h542a066_3
- libtool=2.4.6=h9c3ff4c_1008
- libuuid=2.32.1=h7f98852_1000
- libwebp=1.2.2=h3452ae3_0
- libwebp-base=1.2.2=h7f98852_1
- libxcb=1.13=h7f98852_1004
- libxml2=2.9.12=h885dcf4_1
- libxslt=1.1.33=h0ef7038_3
- libzlib=1.2.11=h36c2ea0_1013
- lz4-c=1.9.3=h9c3ff4c_1
- make=4.3=hd18ef5c_1
- minimap2=2.24=h7132678_1
- ncurses=6.2=h58526e2_4
- numpy=1.19.5=py36hfc0c790_2
- openssl=1.1.1l=h7f98852_0
- pandas=1.1.3=py36he6710b0_0
- pango=1.50.5=h4dcc4a0_0
- parallel=20220222=ha770c72_0
- pcre=8.45=h9c3ff4c_0
- pcre2=10.37=h032f7d1_0
- perl=5.26.2=h36c2ea0_1008
- perl-aceperl=1.92=pl526_2
- perl-algorithm-diff=1.1903=pl526_2
- perl-algorithm-munkres=0.08=pl526_1
- perl-apache-test=1.40=pl526_1
- perl-app-cpanminus=1.7044=pl526_1
- perl-appconfig=1.71=pl526_1
- perl-array-compare=3.0.1=pl526_1
- perl-autoloader=5.74=pl526_2
- perl-base=2.23=pl526_1
- perl-bio-asn1-entrezgene=1.73=pl5262hdfd78af_2
- perl-bio-featureio=1.6.905=pl5262hdfd78af_3
- perl-bio-phylo=0.58=pl5262hdfd78af_3
- perl-bio-samtools=1.43=pl526h1341992_1
- perl-bioperl=1.6.924=6
- perl-bioperl-core=1.007002=pl5262hdfd78af_3
- perl-bioperl-run=1.007002=pl5262hdfd78af_5
- perl-business-isbn=3.004=pl526_0
- perl-business-isbn-data=20140910.003=pl526_0
- perl-cache-cache=1.08=pl526_0
- perl-capture-tiny=0.48=pl526_0
- perl-carp=1.38=pl526_3
- perl-cgi=4.44=pl526h14c3975_1
- perl-class-data-inheritable=0.08=pl526_1
- perl-class-inspector=1.34=pl526_0
- perl-class-load=0.25=pl526_0
- perl-class-load-xs=0.10=pl526h6bb024c_2
- perl-class-method-modifiers=2.12=pl526_0
- perl-clone=0.42=pl526h516909a_0
- perl-common-sense=3.74=pl526_2
- perl-compress-raw-zlib=2.087=pl526hc9558a2_0
- perl-constant=1.33=pl526_1
- perl-convert-binary-c=0.78=pl526h6bb024c_3
- perl-convert-binhex=1.125=pl526_1
- perl-crypt-rc4=2.02=pl526_1
- perl-data-dumper=2.173=pl526_0
- perl-data-optlist=0.110=pl526_2
- perl-data-stag=0.14=pl526_1
- perl-date-format=2.30=pl526_2
- perl-db-file=1.855=pl526h516909a_0
- perl-dbd-sqlite=1.64=pl526h516909a_0
- perl-dbi=1.642=pl526_0
- perl-devel-globaldestruction=0.14=pl526_0
- perl-devel-overloadinfo=0.005=pl526_0
- perl-devel-stacktrace=2.04=pl526_0
- perl-digest-hmac=1.03=pl526_3
- perl-digest-md5=2.55=pl526_0
- perl-digest-perl-md5=1.9=pl526_1
- perl-digest-sha1=2.13=pl526h6bb024c_1
- perl-dist-checkconflicts=0.11=pl526_2
- perl-dynaloader=1.25=pl526_1
- perl-email-date-format=1.005=pl526_2
- perl-encode=2.88=pl526_1
- perl-encode-locale=1.05=pl526_6
- perl-error=0.17027=pl526_1
- perl-eval-closure=0.14=pl526h6bb024c_4
- perl-exception-class=1.44=pl526_0
- perl-exporter=5.72=pl526_1
- perl-exporter-tiny=1.002001=pl526_0
- perl-extutils-makemaker=7.36=pl526_1
- perl-file-listing=6.04=pl526_1
- perl-file-path=2.16=pl526_0
- perl-file-slurp-tiny=0.004=pl526_1
- perl-file-sort=1.01=pl526_2
- perl-file-temp=0.2304=pl526_2
- perl-file-which=1.23=pl526_0
- perl-font-afm=1.20=pl526_2
- perl-font-ttf=1.06=pl526_0
- perl-gd=2.68=pl526he941832_0
- perl-getopt-long=2.50=pl526_1
- perl-graph=0.9704=pl526_1
- perl-graphviz=2.20=1
- perl-html-element-extended=1.18=pl526_1
- perl-html-entities-numbered=0.04=pl526_1
- perl-html-formatter=2.16=pl526_0
- perl-html-parser=3.72=pl526h6bb024c_5
- perl-html-tableextract=2.13=pl526_2
- perl-html-tagset=3.20=pl526_3
- perl-html-tidy=1.60=pl526_0
- perl-html-tree=5.07=pl526_1
- perl-html-treebuilder-xpath=0.14=pl526_1
- perl-http-cookies=6.04=pl526_0
- perl-http-daemon=6.01=pl526_1
- perl-http-date=6.02=pl526_3
- perl-http-message=6.18=pl526_0
- perl-http-negotiate=6.01=pl526_3
- perl-image-info=1.38=pl526_1
- perl-image-size=3.300=pl526_2
- perl-io-html=1.001=pl526_2
- perl-io-sessiondata=1.03=pl526_1
- perl-io-socket-ssl=2.066=pl526_0
- perl-io-string=1.08=pl526_3
- perl-io-stringy=2.111=pl526_1
- perl-io-tty=1.12=pl526_1
- perl-ipc-run=20180523.0=pl526_0
- perl-ipc-sharelite=0.17=pl526h6bb024c_1
- perl-jcode=2.07=pl526_2
- perl-json=4.02=pl526_0
- perl-json-xs=2.34=pl526h6bb024c_3
- perl-libwww-perl=6.39=pl526_0
- perl-libxml-perl=0.08=pl526_2
- perl-list-moreutils=0.428=pl526_1
- perl-list-moreutils-xs=0.428=pl526_0
- perl-local-lib=2.000024=pl526_0
- perl-lwp-mediatypes=6.04=pl526_0
- perl-lwp-protocol-https=6.07=pl526_4
- perl-lwp-simple=6.15=pl526h470a237_4
- perl-mailtools=2.21=pl526_0
- perl-math-cdf=0.1=pl526h14c3975_5
- perl-math-derivative=1.01=pl526_0
- perl-math-random=0.72=pl526h14c3975_2
- perl-math-spline=0.02=pl526_2
- perl-mime-base64=3.15=pl526_1
- perl-mime-lite=3.030=pl526_1
- perl-mime-tools=5.508=pl526_1
- perl-mime-types=2.17=pl526_0
- perl-mldbm=2.05=pl526_1
- perl-module-build=0.4224=pl526h470a237_1
- perl-module-implementation=0.09=pl526_2
- perl-module-runtime=0.016=pl526_1
- perl-module-runtime-conflicts=0.003=pl526_0
- perl-moo=2.003004=pl526_0
- perl-moose=2.2011=pl526hf484d3e_1
- perl-mozilla-ca=20180117=pl526_1
- perl-mro-compat=0.13=pl526_0
- perl-net-http=6.19=pl526_0
- perl-net-ssleay=1.88=pl526h90d6eec_0
- perl-ntlm=1.09=pl526_4
- perl-ole-storage_lite=0.19=pl526_3
- perl-package-deprecationmanager=0.17=pl526_0
- perl-package-stash=0.38=pl526hf484d3e_1
- perl-package-stash-xs=0.28=pl526hf484d3e_1
- perl-parallel-forkmanager=2.02=pl526_0
- perl-params-util=1.07=pl526h6bb024c_4
- perl-parent=0.236=pl526_1
- perl-parse-recdescent=1.967015=pl526_0
- perl-pathtools=3.75=pl526h14c3975_1
- perl-pdf-api2=2.035=pl526_0
- perl-postscript=0.06=pl526_2
- perl-role-tiny=2.000008=pl526_0
- perl-scalar-list-utils=1.52=pl526h516909a_0
- perl-set-scalar=1.29=pl526_2
- perl-soap-lite=1.19=pl526_1
- perl-socket=2.027=pl526_1
- perl-sort-naturally=1.03=pl526_2
- perl-spreadsheet-parseexcel=0.65=pl526_2
- perl-spreadsheet-writeexcel=2.40=pl526_2
- perl-statistics-descriptive=3.0702=pl526_0
- perl-storable=3.15=pl526h14c3975_0
- perl-sub-exporter=0.987=pl526_2
- perl-sub-exporter-progressive=0.001013=pl526_0
- perl-sub-identify=0.14=pl526h14c3975_0
- perl-sub-install=0.928=pl526_2
- perl-sub-name=0.21=pl526_1
- perl-sub-quote=2.006003=pl526_1
- perl-sub-uplevel=0.2800=pl526h14c3975_2
- perl-svg=2.84=pl526_0
- perl-svg-graph=0.02=pl526_3
- perl-task-weaken=1.06=pl526_0
- perl-template-toolkit=2.26=pl526_1
- perl-test-deep=1.128=pl526_1
- perl-test-differences=0.67=pl526_0
- perl-test-exception=0.43=pl526_2
- perl-test-leaktrace=0.16=pl526h14c3975_2
- perl-test-most=0.35=pl526_0
- perl-test-pod=1.52=pl526_0
- perl-test-requiresinternet=0.05=pl526_0
- perl-test-warn=0.36=pl526_1
- perl-text-diff=1.45=pl526_0
- perl-threaded=5.32.1=hdfd78af_1
- perl-tie-ixhash=1.23=pl526_2
- perl-time-local=1.28=pl526_1
- perl-timedate=2.30=pl526_1
- perl-tree-dag_node=1.31=pl526_0
- perl-try-tiny=0.30=pl526_1
- perl-type-tiny=1.004004=pl526_0
- perl-types-serialiser=1.0=pl526_2
- perl-unicode-map=0.112=pl526h6bb024c_3
- perl-uri=1.76=pl526_0
- perl-www-robotrules=6.02=pl526_3
- perl-xml-dom=1.46=pl526_0
- perl-xml-dom-xpath=0.14=pl526_1
- perl-xml-filter-buffertext=1.01=pl526_2
- perl-xml-libxml=2.0132=pl526h7ec2d77_1
- perl-xml-libxslt=1.94=pl526_1
- perl-xml-namespacesupport=1.12=pl526_0
- perl-xml-parser=2.44_01=pl5262hc3e0081_1002
- perl-xml-regexp=0.04=pl526_2
- perl-xml-sax=1.02=pl526_0
- perl-xml-sax-base=1.09=pl526_0
- perl-xml-sax-expat=0.51=pl526_3
- perl-xml-sax-writer=0.57=pl526_0
- perl-xml-simple=2.25=pl526_1
- perl-xml-twig=3.52=pl526_2
- perl-xml-writer=0.625=pl526_2
- perl-xml-xpath=1.44=pl526_0
- perl-xml-xpathengine=0.14=pl526_2
- perl-xsloader=0.24=pl526_0
- perl-yaml=1.29=pl526_0
- pip=20.0.2=py36_1
- pixman=0.40.0=h36c2ea0_0
- pthread-stubs=0.4=h36c2ea0_1001
- python=3.6.15=hb7a2778_0_cpython
- python-dateutil=2.8.1=py_0
- python_abi=3.6=2_cp36m
- pytz=2020.1=py_0
- r-assertthat=0.2.1=r41hc72bb7e_2
- r-backports=1.4.1=r41hcfec24a_0
- r-base=4.1.2=h2553ce4_1
- r-bitops=1.0_7=r41hcfec24a_0
- r-brio=1.1.3=r41hcfec24a_0
- r-callr=3.7.0=r41hc72bb7e_0
- r-catools=1.18.2=r41h03ef668_0
- r-cli=3.2.0=r41h03ef668_0
- r-colorspace=2.0_3=r41h06615bd_0
- r-crayon=1.5.0=r41hc72bb7e_0
- r-desc=1.4.0=r41hc72bb7e_0
- r-diffobj=0.3.5=r41hcfec24a_0
- r-digest=0.6.29=r41h03ef668_0
- r-ellipsis=0.3.2=r41hcfec24a_0
- r-evaluate=0.15=r41hc72bb7e_0
- r-fansi=1.0.2=r41hcfec24a_0
- r-farver=2.1.0=r41h03ef668_0
- r-ggplot2=3.3.5=r41hc72bb7e_0
- r-glue=1.6.2=r41h06615bd_0
- r-gplots=3.1.1=r41hc72bb7e_0
- r-gtable=0.3.0=r41hc72bb7e_3
- r-gtools=3.9.2=r41hcfec24a_0
- r-isoband=0.2.5=r41h03ef668_0
- r-jsonlite=1.8.0=r41h06615bd_0
- r-kernsmooth=2.23_20=r41h742201e_0
- r-labeling=0.4.2=r41hc72bb7e_1
- r-lattice=0.20_45=r41hcfec24a_0
- r-lifecycle=1.0.1=r41hc72bb7e_0
- r-magrittr=2.0.2=r41hcfec24a_0
- r-mass=7.3_55=r41hcfec24a_0
- r-matrix=1.4_0=r41he454529_0
- r-mgcv=1.8_39=r41h0154571_0
- r-munsell=0.5.0=r41hc72bb7e_1004
- r-nlme=3.1_155=r41h859d828_0
- r-pillar=1.7.0=r41hc72bb7e_0
- r-pkgconfig=2.0.3=r41hc72bb7e_1
- r-pkgload=1.2.4=r41h03ef668_0
- r-praise=1.0.0=r41hc72bb7e_1005
- r-processx=3.5.2=r41hcfec24a_0
- r-ps=1.6.0=r41hcfec24a_0
- r-r6=2.5.1=r41hc72bb7e_0
- r-randomforest=4.6_14=r41h859d828_1004
- r-rcolorbrewer=1.1_2=r41h785f33e_1003
- r-rcpp=1.0.8=r41h03ef668_0
- r-rematch2=2.1.2=r41hc72bb7e_1
- r-rlang=0.4.12=r41hcfec24a_0
- r-rocr=1.0_11=r41hc72bb7e_1
- r-rprojroot=2.0.2=r41hc72bb7e_0
- r-rstudioapi=0.13=r41hc72bb7e_0
- r-scales=1.1.1=r41hc72bb7e_0
- r-testthat=3.1.2=r41h03ef668_0
- r-tibble=3.1.6=r41hcfec24a_0
- r-utf8=1.2.2=r41hcfec24a_0
- r-vctrs=0.3.8=r41hcfec24a_1
- r-viridislite=0.4.0=r41hc72bb7e_0
- r-waldo=0.3.1=r41hc72bb7e_0
- r-withr=2.5.0=r41hc72bb7e_0
- readline=8.1=h46c0cb4_0
- seqkit=2.1.0=h9ee0642_0
- setuptools=49.6.0=py36h5fab9bb_3
- six=1.15.0=py_0
- sqlite=3.37.0=h9cd32fc_0
- stringtie=2.2.1=hecb563c_2
- sysroot_linux-64=2.12=he073ed8_15
- tidyp=1.04=hec16e2b_4
- tk=8.6.12=h27826a3_0
- tktable=2.10=hb7b940f_3
- transdecoder=5.5.0=pl5262hdfd78af_4
- wheel=0.37.1=pyhd8ed1ab_0
- xorg-kbproto=1.0.7=h7f98852_1002
- xorg-libice=1.0.10=h7f98852_0
- xorg-libsm=1.2.3=hd9c2040_1000
- xorg-libx11=1.7.2=h7f98852_0
- xorg-libxau=1.0.9=h7f98852_0
- xorg-libxdmcp=1.1.3=h7f98852_0
- xorg-libxext=1.3.4=h7f98852_1
- xorg-libxrender=0.9.10=h7f98852_1003
- xorg-libxt=1.2.1=h7f98852_2
- xorg-renderproto=0.11.1=h7f98852_1002
- xorg-xextproto=7.3.0=h7f98852_1002
- xorg-xproto=7.0.31=h7f98852_1007
- xz=5.2.5=h516909a_1
- zlib=1.2.11=h36c2ea0_1013
- zstd=1.5.2=ha95c52a_0