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Release v2024.11.26
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cgohlke committed Nov 27, 2024
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:Author: `Christoph Gohlke <https://www.cgohlke.com>`_
:License: BSD 3-Clause
:Version: 2024.10.10
:Version: 2024.11.26
:DOI: `10.5281/zenodo.10120021 <https://doi.org/10.5281/zenodo.10120021>`_

Quickstart
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(other versions may work):

- `CPython <https://www.python.org>`_ 3.10.11, 3.11.9, 3.12.7, 3.13.0 64-bit
- `NumPy <https://pypi.org/project/numpy>`_ 2.1.2
- `Xarray <https://pypi.org/project/xarray>`_ 2024.9.0 (recommended)
- `NumPy <https://pypi.org/project/numpy>`_ 2.1.3
- `Xarray <https://pypi.org/project/xarray>`_ 2024.11.0 (recommended)
- `Matplotlib <https://pypi.org/project/matplotlib/>`_ 3.9.2 (optional)
- `Tifffile <https://pypi.org/project/tifffile/>`_ 2024.9.20 (optional)
- `Numcodecs <https://pypi.org/project/numcodecs/>`_ 0.13.1 (optional)
- `Numcodecs <https://pypi.org/project/numcodecs/>`_ 0.14.1 (optional)
- `Cython <https://pypi.org/project/cython/>`_ 3.0.11 (build)

Revisions
---------

2024.11.26

- Support bi-directional scanning (FLIMbee scanner).
- Drop support for Python 3.9.

2024.10.10

- Also trim leading channels without photons (breaking).
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Notes
-----

The `Chan Zuckerberg Initiative
<https://chanzuckerberg.com/eoss/proposals/phasorpy-a-python-library-for-phasor-analysis-of-flim-and-spectral-imaging>`_
financially supported the development of this library.

`PicoQuant GmbH <https://www.picoquant.com/>`_ is a manufacturer of photonic
components and instruments.

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<https://github.com/PicoQuant/PicoQuant-Time-Tagged-File-Format-Demos/tree/master/doc>`_.

The following features are currently not implemented: PT2 and PT3 files,
decoding images from T2 formats, bidirectional scanning, and deprecated
image reconstruction. Line-scanning is not tested.
decoding images from T2 formats, bidirectional sinusoidal scanning, and
deprecated image reconstruction. Line-scanning is not tested.

Other Python or C/C++ modules for reading PicoQuant files are:
Other modules for reading or writing PicoQuant files are:

- `Read_PTU.py
<https://github.com/PicoQuant/PicoQuant-Time-Tagged-File-Format-Demos/blob/master/PTU/Python/Read_PTU.py>`_
- `readPTU_FLIM <https://github.com/SumeetRohilla/readPTU_FLIM>`_
- `fastFLIM <https://github.com/RobertMolenaar-UT/fastFLIM>`_
- `PyPTU <https://gitlab.inria.fr/jrye/pyptu>`_
- `PTU_Reader <https://github.com/UU-cellbiology/PTU_Reader>`_
- `PTU_Writer <https://github.com/ekatrukha/PTU_Writer>`_
- `FlimReader <https://github.com/flimfit/FlimReader>`_
- `tttrlib <https://github.com/Fluorescence-Tools/tttrlib>`_
- `picoquantio <https://github.com/tsbischof/picoquantio>`_
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