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1. peakable peakable Public

   peakable provides tools for peak call QC for CUT&RUN and CUT&Tag-seq, importing/exporting MACS2 or SEACR peak files, and downstream analysis.

   R 1

2. pocketbase-app pocketbase-app Public

   Web application for the backend pocketbase service for Sarthy Lab

   Svelte 1

3. rmskStats rmskStats Public

   Tools to count repeat elements form RepeatMasker (RMSK) and infer the enrichment of repeats

   R

4. Dux4FamilyGeneNetwork Dux4FamilyGeneNetwork Public

   R Codes to support our Nature Genetic manuscript: Conservation and innovation in the DUX4-family gene network. Nat. Genet. (2017). doi:10.1038/ng.3846

   R

5. hg38 hg38 Public

   Tools to build TxDb and EnsDb packages of genome build hg38

   R

6. domainCalling domainCalling Public

   Tools to call large binding domains from CutAndRun-seq or to identify long non-coding RNA transcripts from RNA-seq

   R