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Add HL7v2 to FHIR support #257

Add HL7v2 to FHIR support

Add HL7v2 to FHIR support #257

name: Python package
on:
push:
branches: [ "main" ]
pull_request:
branches: [ "main" ]
permissions:
statuses: write
concurrency:
group: "package"
cancel-in-progress: false
jobs:
linting-check:
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
python-version: ["3.12"]
steps:
- name: Check out repository
uses: actions/checkout@v4
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Install Poetry
uses: snok/install-poetry@v1
with:
virtualenvs-create: true
virtualenvs-in-project: true
installer-parallel: true
- name: Install project
run: make install
- name: flake8
run: |
make linting-check
type-check:
needs: linting-check
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
python-version: ["3.12"]
steps:
- name: Check out repository
uses: actions/checkout@v4
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Install Poetry
uses: snok/install-poetry@v1
with:
virtualenvs-create: true
virtualenvs-in-project: true
installer-parallel: true
- name: Install project
run: make install
- name: mypy
run: make type-check
test:
needs: type-check
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest, windows-latest, macos-latest]
python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"]
defaults:
run:
shell: bash
runs-on: ${{ matrix.os }}
steps:
- name: Check out repository
uses: actions/checkout@v4
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
id: python
with:
python-version: ${{ matrix.python-version }}
update-environment: false
- name: Install Poetry
uses: snok/install-poetry@v1
with:
virtualenvs-create: true
virtualenvs-in-project: true
installer-parallel: true
- name: Verify Poetry Install
run: poetry --version
- name: Setup Poetry Environment
run: poetry env use '${{ steps.python.outputs.python-path }}'
- name: Verify Poetry Environment
run: |
actual=$(poetry run python --version)
expected='Python\s*${{ matrix.python-version }}'
if [ -z "$(echo $actual | grep $expected)" ]; then
echo $actual '!=' $expected
exit 1
fi
- name: Install project
run: poetry install --no-interaction
- name: Run tests
run: poetry run pytest
cov:
needs: test
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
python-version: ["3.12"]
steps:
- name: Check out repository
uses: actions/checkout@v4
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Install Poetry
uses: snok/install-poetry@v1
with:
virtualenvs-create: true
virtualenvs-in-project: true
installer-parallel: true
- name: Install project
run: make install
- name: Build Coverage Report
run: make cov
- run: poetry run smokeshow upload htmlcov
env:
SMOKESHOW_GITHUB_STATUS_DESCRIPTION: Coverage {coverage-percentage}
SMOKESHOW_GITHUB_COVERAGE_THRESHOLD: 10
SMOKESHOW_GITHUB_CONTEXT: coverage
SMOKESHOW_GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
SMOKESHOW_AUTH_KEY: ${{ secrets.SMOKESHOW_AUTH_KEY }}