From 4834ff792097ecb512c7a4e57de5f6eb4e5f07c0 Mon Sep 17 00:00:00 2001
From: Mike Henry <11765982+mikemhenry@users.noreply.github.com>
Date: Mon, 24 Jul 2023 08:49:54 -0700
Subject: [PATCH] Remove example testing (#1214)

---
 perses/tests/test_examples.py | 72 -----------------------------------
 1 file changed, 72 deletions(-)
 delete mode 100644 perses/tests/test_examples.py

diff --git a/perses/tests/test_examples.py b/perses/tests/test_examples.py
deleted file mode 100644
index 707164a1e..000000000
--- a/perses/tests/test_examples.py
+++ /dev/null
@@ -1,72 +0,0 @@
-#!/usr/bin/env python
-
-# ======================================================================
-# MODULE DOCSTRING
-# ======================================================================
-
-"""
-Test that the examples in the repo run without errors.
-"""
-
-# ======================================================================
-# GLOBAL IMPORTS
-# ======================================================================
-
-import sys
-
-import pathlib
-import pytest
-import subprocess
-from perses.tests.utils import enter_temp_directory
-
-ROOT_DIR_PATH = pathlib.Path(__file__).joinpath("../../../").resolve()
-SLOW_EXAMPLES_KEYWORDS = ("barnase-barstar", "kinase-neq-switching")
-NOT_EXAMPLES_KEYWORDS = ("analyze-benchmark", "moonshot-mainseries")
-
-
-def run_script_file(file_path, cmd_args=None):
-    """Run through the shell a python script."""
-    with enter_temp_directory():
-        # Make sure we grab the python executable in our env
-        cmd = [f"{sys.executable}", file_path]
-        print(cmd)
-        # Extend cmd list with given cmd_args
-        if cmd_args:
-            cmd.extend(cmd_args)
-        try:
-            subprocess.run(cmd, capture_output=True, check=True, shell=True)
-        except subprocess.CalledProcessError as error:
-            raise Exception(f"Example {file_path} failed. STDERR: {error.stderr.decode()}")
-
-
-def find_example_scripts():
-    """Find all Python scripts, excluding Jupyter notebooks, in the examples folder.
-    Returns
-    -------
-    example_file_paths : List[str]
-        List of full paths to python scripts to execute.
-    """
-    examples_dir_path = ROOT_DIR_PATH.joinpath("examples")
-
-    example_file_paths = []
-    for example_file_path in examples_dir_path.glob("*/*.py"):
-        # TODO: find a better way to mark slow examples
-        example_posix_path = example_file_path.as_posix()
-        # mark slow examples
-        if any(example in example_posix_path for example in SLOW_EXAMPLES_KEYWORDS):
-            example_posix_path = pytest.param(example_posix_path, marks=pytest.mark.slow)
-        # mark non-examples
-        elif any(example in example_posix_path for example in NOT_EXAMPLES_KEYWORDS):
-            example_posix_path = pytest.param(example_posix_path, marks=pytest.mark.skip("not an example"))
-        example_file_paths.append(example_posix_path)
-
-    return example_file_paths
-
-
-# ======================================================================
-# TESTS
-# ======================================================================
-@pytest.mark.parametrize("example_file_path", find_example_scripts())
-def test_examples(example_file_path):
-    """Test that the example run without errors."""
-    run_script_file(example_file_path)