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1. HiCAT HiCAT Public

   High precision, marker-based, hierarchical cell-type annotation tool for single-cell RNA-seq data

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2. RCTIcollection RCTIcollection Public

   An easy-to-use R wrapper function to run celltype identifiers for single-cell RNA-seq data

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3. StringFix StringFix Public

   An annotation-guided transcriptome assembler

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4. scoda_explorer scoda_explorer Public

   A visualization package to explore the SCODA results

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5. MarkerCount MarkerCount Public

   MarkerCount is a python3 cell-type identification toolkit for single-cell RNA-Seq experiments.

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6. InferPloidy InferPloidy Public

   Ploidy inference from CNV estimates