[FIX] fix octave create roi #12
Workflow file for this run
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| --- | |
| name: tests and coverage with octave | |
| env: | |
| OCTFLAGS: --no-gui --no-window-system --silent | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: ['*'] | |
| schedule: | |
| - cron: 0 0 1 * * | |
| # Allows you to run this workflow manually from the Actions tab | |
| workflow_dispatch: | |
| jobs: | |
| tests_octave: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Install CPP_ROI | |
| uses: actions/checkout@v4 | |
| with: | |
| submodules: true | |
| fetch-depth: 0 | |
| - name: Install SPM | |
| run: | | |
| git clone https://github.com/spm/spm12.git --depth 1 | |
| - name: Install Moxunit and MOcov | |
| run: | | |
| git clone https://github.com/MOxUnit/MOxUnit.git --depth 1 | |
| git clone https://github.com/MOcov/MOcov.git --depth 1 | |
| - name: Install octave | |
| run: | | |
| sudo apt-get -y -qq update | |
| sudo apt-get -y install \ | |
| octave \ | |
| liboctave-dev\ | |
| octave-common \ | |
| octave-io \ | |
| octave-image \ | |
| octave-signal \ | |
| octave-statistics | |
| make -C MOxUnit install | |
| make -C MOcov install | |
| - name: Compile SPM | |
| run: | | |
| make -C spm12/src PLATFORM=octave distclean | |
| make -C spm12/src PLATFORM=octave | |
| make -C spm12/src PLATFORM=octave install | |
| octave $OCTFLAGS --eval "addpath(fullfile(pwd, 'spm12')); savepath();" | |
| - name: Add bids-matlab | |
| run: make install_dev | |
| - name: Run tests | |
| run: | | |
| octave $OCTFLAGS --eval "addpath(fullfile(pwd, 'tests', 'utils')); savepath();" | |
| octave $OCTFLAGS --eval "cd(fullfile(getenv('GITHUB_WORKSPACE'), '.github', 'workflows')); run tests_octave;" | |
| - name: Code coverage | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| file: coverage.xml | |
| flags: octave | |
| name: codecov-umbrella | |
| fail_ci_if_error: false |