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name: tests and coverage with matlab | ||
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concurrency: | ||
group: ${{ github.workflow }}-${{ github.ref }} | ||
cancel-in-progress: true | ||
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on: | ||
push: | ||
branches: | ||
- main | ||
pull_request: | ||
branches: ['*'] | ||
schedule: | ||
- cron: 0 0 1 * * | ||
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# Allows you to run this workflow manually from the Actions tab | ||
workflow_dispatch: | ||
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jobs: | ||
tests_matlab: | ||
runs-on: ubuntu-latest | ||
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steps: | ||
- name: Install CPP_ROI | ||
uses: actions/checkout@v4 | ||
with: | ||
submodules: true | ||
fetch-depth: 0 | ||
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- name: Install SPM | ||
run: | | ||
git clone https://github.com/spm/spm12.git --depth 1 | ||
- name: Install Moxunit and MOcov | ||
run: | | ||
git clone https://github.com/MOxUnit/MOxUnit.git --depth 1 | ||
git clone https://github.com/MOcov/MOcov.git --depth 1 | ||
- name: Install octave | ||
run: | | ||
sudo apt-get -y -qq update | ||
sudo apt-get -y install \ | ||
octave \ | ||
liboctave-dev\ | ||
octave-common \ | ||
octave-io \ | ||
octave-image \ | ||
octave-signal \ | ||
octave-statistics | ||
make -C MOxUnit install | ||
make -C MOcov install | ||
- name: Compile SPM | ||
run: | | ||
make -C spm12/src PLATFORM=octave distclean | ||
make -C spm12/src PLATFORM=octave | ||
make -C spm12/src PLATFORM=octave install | ||
octave $OCTFLAGS --eval "addpath(fullfile(pwd, 'spm12')); savepath();" | ||
- name: Add bids-matlab | ||
run: make install_dev | ||
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- name: Run tests | ||
run: | | ||
octave $OCTFLAGS --eval "addpath(fullfile(pwd, 'tests', 'utils')); savepath();" | ||
octave $OCTFLAGS --eval "cd(fullfile(getenv('GITHUB_WORKSPACE'), '.github', 'workflows')); run tests_matlab;" | ||
- name: Code coverage | ||
uses: codecov/codecov-action@v4 | ||
with: | ||
file: coverage.xml | ||
flags: octave | ||
name: codecov-umbrella | ||
fail_ci_if_error: false |