From 5304dd3687eab03331f024a30e2b36fccce2f1ec Mon Sep 17 00:00:00 2001
From: nfrerebeau <nicolas.frerebeau@u-bordeaux-montaigne.fr>
Date: Mon, 23 Sep 2024 19:55:00 +0200
Subject: [PATCH] Update citation

---
 DESCRIPTION   |  2 +-
 README.Rmd    |  3 ++-
 README.md     | 15 ++++-----------
 codemeta.json | 30 ++++++++++++++++++++++++++++--
 inst/CITATION | 16 +++++++++++++++-
 5 files changed, 50 insertions(+), 16 deletions(-)

diff --git a/DESCRIPTION b/DESCRIPTION
index b24a2c8..a1a9b5d 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,5 +1,5 @@
 Package: gammaShiny
-Title: 'Shiny' Applications for the R Package 'gamma'
+Title: 'shiny' Applications for the R Package 'gamma'
 Version: 0.2.0
 Authors@R: c(
     person("Nicolas", "Frerebeau", , "nicolas.frerebeau@u-bordeaux-montaigne.fr", role = "aut",
diff --git a/README.Rmd b/README.Rmd
index be89fd6..1f75402 100644
--- a/README.Rmd
+++ b/README.Rmd
@@ -30,7 +30,8 @@ knitr::opts_chunk$set(
 A collection of [**shiny**](https://shiny.rstudio.com) application that provides exhanced graphical user interfaces for the [**gamma**](https://github.com/crp2a/gamma) package.
 
 ```{r citation, echo=FALSE, comment=''}
-utils::citation("gammaShiny")
+cite <- utils::citation("gammaShiny")
+print(cite, bibtex = FALSE)
 ```
 
 ## Installation
diff --git a/README.md b/README.md
index e3b2fb4..c3f73df 100644
--- a/README.md
+++ b/README.md
@@ -29,17 +29,10 @@ provides exhanced graphical user interfaces for the
       Estimation from In-Situ Gamma-Ray Spectrometry Measurements."
       _Ancient TL_, *38*(2), 1-5.
 
-    Une entrée BibTeX pour les utilisateurs LaTeX est
-
-      @Article{,
-        author = {Brice Lebrun and Nicolas Frerebeau and Guilhem Paradol and Guillaume Guérin and Norbert Mercier and Chantal Tribolo and Christelle Lahaye and Magali Rizza},
-        title = {{gamma: An R Package for Dose Rate Estimation from In-Situ Gamma-Ray Spectrometry Measurements}},
-        year = {2020},
-        journal = {Ancient TL},
-        volume = {38},
-        number = {2},
-        pages = {1-5},
-      }
+      Frerebeau N, Lebrun B, Kreutzer S (2024). _gammaShiny: shiny
+      Applications for the R Package gamma_. Université Bordeaux Montaigne,
+      Pessac, France. doi:10.5281/zenodo.4139005
+      <https://doi.org/10.5281/zenodo.4139005>, R package version 0.2.0.
 
 ## Installation
 
diff --git a/codemeta.json b/codemeta.json
index eb4a7d0..3b83f38 100644
--- a/codemeta.json
+++ b/codemeta.json
@@ -3,7 +3,7 @@
   "@type": "SoftwareSourceCode",
   "identifier": "gammaShiny",
   "description": "A collection of 'shiny' applications for the R package 'gamma'.",
-  "name": "gammaShiny: 'Shiny' Applications for the R Package 'gamma'",
+  "name": "gammaShiny: 'shiny' Applications for the R Package 'gamma'",
   "codeRepository": "https://github.com/crp2a/gammaShiny",
   "issueTracker": "https://github.com/crp2a/gammaShiny/issues",
   "license": "https://spdx.org/licenses/GPL-3.0",
@@ -202,7 +202,7 @@
     },
     "SystemRequirements": null
   },
-  "fileSize": "328.081KB",
+  "fileSize": "328.18KB",
   "citation": [
     {
       "@type": "ScholarlyArticle",
@@ -261,6 +261,32 @@
           "name": "Ancient TL"
         }
       }
+    },
+    {
+      "@type": "SoftwareSourceCode",
+      "datePublished": "2024",
+      "author": [
+        {
+          "@type": "Person",
+          "givenName": "Nicolas",
+          "familyName": "Frerebeau"
+        },
+        {
+          "@type": "Person",
+          "givenName": "Brice",
+          "familyName": "Lebrun"
+        },
+        {
+          "@type": "Person",
+          "givenName": "Sebastian",
+          "familyName": "Kreutzer"
+        }
+      ],
+      "name": "{gammaShiny: shiny Applications for the R Package gamma}",
+      "identifier": "10.5281/zenodo.4139005",
+      "description": "R package version 0.2.0",
+      "@id": "https://doi.org/10.5281/zenodo.4139005",
+      "sameAs": "https://doi.org/10.5281/zenodo.4139005"
     }
   ],
   "releaseNotes": "https://github.com/crp2a/gammaShiny/blob/master/NEWS.md",
diff --git a/inst/CITATION b/inst/CITATION
index 547b189..7eb8f63 100644
--- a/inst/CITATION
+++ b/inst/CITATION
@@ -1,6 +1,7 @@
+citHeader("To cite gammaShiny in publications use:")
 bibentry(
   bibtype      = "Article",
-  header       = "To cite gammaShiny in publications use:",
+  key          = "lebrun2020",
   author       = c(person("Brice", "Lebrun", role = "aut"),
                    person("Nicolas", "Frerebeau", role = "aut"),
                    person("Guilhem", "Paradol", role = "aut"),
@@ -16,3 +17,16 @@ bibentry(
   number       = "2",
   pages        = "1-5"
 )
+bibentry(
+  bibtype      = "Manual",
+  key          = "R-gammaShiny",
+  author       = c(person("Nicolas", "Frerebeau", role = "aut"),
+                   person("Brice", "Lebrun", role = "aut"),
+                   person("Sebastian", "Kreutzer", rol = "aut")),
+  title        = "{gammaShiny: shiny Applications for the R Package gamma}",
+  year         = "2024",
+  organization = "Université Bordeaux Montaigne",
+  address      = "Pessac, France",
+  note         = sprintf("R package version %s", meta$Version),
+  doi          = "10.5281/zenodo.4139005"
+)