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ci.yml
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name: CI
on:
push:
branches:
- main
tags:
- "**"
pull_request:
env:
NUMBA_NUM_THREADS: 1
OMP_NUM_THREADS: 1
MKL_NUM_THREADS: 1
MPLBACKEND: Agg
PYTEST_ADDOPTS: --color=yes
GITHUB_PR_NUMBER: ${{ github.event.number }}
jobs:
lint:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 0
- uses: actions/setup-python@v5
with:
python-version: "3.10"
- name: Check README syntax
run: |
pip install restructuredtext-lint
restructuredtext-lint README.rst
- uses: pre-commit/action@v3.0.1
with:
extra_args: --files $(git diff origin/main --name-only)
tests:
runs-on: ${{ matrix.os }}
needs: lint
strategy:
matrix:
include:
- os: ubuntu-latest
python-version: "3.10"
install-method: mamba
- os: ubuntu-latest
python-version: "3.10"
install-method: pip
- os: ubuntu-latest
python-version: "3.11"
install-method: mamba
- os: ubuntu-latest
python-version: "3.12"
install-method: mamba
extra-args: ["codecov"]
- os: ubuntu-latest
python-version: "3.12"
install-method: pip
# macos 13 image is x86-based
- os: macos-13
python-version: "3.10"
install-method: pip
# macos 14 image is arm64 based
- os: macos-14
python-version: "3.12"
install-method: mamba
defaults:
run:
# We need login shells (-l) for micromamba to work.
shell: bash -leo pipefail {0}
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 0
- name: cache test data
uses: actions/cache@v4
with:
path: ~/.cache/ctapipe
key: ctapipe-test-data
- name: Prepare mamba installation
if: matrix.install-method == 'mamba' && contains(github.event.pull_request.labels.*.name, 'documentation-only') == false
env:
PYTHON_VERSION: ${{ matrix.python-version }}
run: |
# setup correct python version
sed -i -e "s/- python=.*/- python=$PYTHON_VERSION/g" environment.yml
- name: mamba setup
if: matrix.install-method == 'mamba' && contains(github.event.pull_request.labels.*.name, 'documentation-only') == false
uses: mamba-org/setup-micromamba@v1
with:
environment-file: environment.yml
cache-downloads: true
- name: Python setup
if: matrix.install-method == 'pip' && contains(github.event.pull_request.labels.*.name, 'documentation-only') == false
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
check-latest: true
- if: matrix.install-method == 'pip' && runner.os == 'macOS' && contains(github.event.pull_request.labels.*.name, 'documentation-only') == false
name: Fix Python PATH on macOS
# See https://github.com/actions/setup-python/issues/132 and
# https://github.com/actions/setup-python/issues/132#issuecomment-779406058
# Login shells on macOS prepend system paths, so we need to
# prepend the python path from actions/setup-python.
# Micromamba sets up ~/.bash_profile, where we need to set the path now.
run: |
tee -a ~/.bash_profile <<<'export PATH="$pythonLocation/bin:$PATH"'
- name: Install dependencies
if: contains(github.event.pull_request.labels.*.name, 'documentation-only') == false
env:
PYTHON_VERSION: ${{ matrix.python-version }}
run: |
python --version | grep "Python ${PYTHON_VERSION}"
pip install -e .[tests]
pip install ./test_plugin
pip freeze
pip list
- name: ctapipe-info
if: contains(github.event.pull_request.labels.*.name, 'documentation-only') == false
run: |
ctapipe-info --all
- name: Tests
if: contains(github.event.pull_request.labels.*.name, 'documentation-only') == false
run: |
pytest -n auto --dist loadscope \
--cov --cov-report=xml \
--doctest-modules --doctest-glob='*.rst' \
--ignore=docs/conf.py \
src/ctapipe docs
ctapipe-info --version
- name: Store info for sonar
env:
REF_NAME: ${{ github.ref_name }}
REF_TYPE: ${{ github.ref_type }}
PR_NUMBER: ${{ github.event.pull_request.number }}
SOURCE_REPOSITORY: ${{ github.event.pull_request.head.repo.full_name }}
SOURCE_BRANCH: ${{ github.event.pull_request.head.ref }}
TARGET_BRANCH: ${{ github.event.pull_request.base.ref }}
run: |
echo "PR_NUMBER=${PR_NUMBER}" >> sonar_env
echo "SOURCE_REPOSITORY=${SOURCE_REPOSITORY}" >> sonar_env
echo "SOURCE_BRANCH=${SOURCE_BRANCH}" >> sonar_env
echo "TARGET_BRANCH=${TARGET_BRANCH}" >> sonar_env
cat sonar_env
# upload coverage report for sonar workflow
- uses: actions/upload-artifact@v4
if: contains(matrix.extra-args, 'codecov') && contains(github.event.pull_request.labels.*.name, 'documentation-only') == false
with:
name: ctapipe-coverage-report
path: |
coverage.xml
sonar_env
docs:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Set up Python
uses: actions/setup-python@v5
with:
python-version: "3.10"
- name: Install doc dependencies
run: |
sudo apt update --yes && sudo apt install --yes git build-essential pandoc graphviz ffmpeg
pip install -U pip towncrier setuptools
pip install -e .[docs]
pip install ./test_plugin
git describe --tags
python -c 'import ctapipe; print(ctapipe.__version__)'
- name: Produce Changelog
run: |
towncrier build --yes
- name: Build docs
run: make doc