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Merge pull request #1060 from rl3328/patch-1
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Update containers.csv
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@gaow
gaow authored Sep 16, 2024
2 parents 39ea612 + 8f42adc commit 7992998
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2 changes: 1 addition & 1 deletion container/README.md
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Expand Up @@ -97,7 +97,7 @@ On occasion, you may see errors that a download or upload has failed while build
| r-rmtstat | [Link](https://cran.r-project.org/web/packages/RMTstat/index.html) | [Link](https://anaconda.org/conda-forge/r-rmtstat) | pcatools | 0.3.1 | conda‑forge | BSD‑3‑Clause |
| r-fsusier | [Link](https://github.com/stephenslab/fsusier) | [Link](https://anaconda.org/dnachun/r-fsusier) | pecotmr | 0.2.0 | dnachun | GPL‑3.0‑or‑later |
| r-mvsusier | [Link](https://github.com/stephenslab/mvsusieR) | [Link](https://anaconda.org/dnachun/r-mvsusier) | pecotmr | 0.1.7 | dnachun | GPL‑3.0‑or‑later |
| r-pecotmr | [Link](https://github.com/cumc/pecotmr) | [Link](https://anaconda.org/dnachun/r-pecotmr) | pecotmr | 0.1.66 | dnachun | GPL‑3.0‑or‑later |
| r-pecotmr | [Link](https://github.com/cumc/pecotmr) | [Link](https://anaconda.org/dnachun/r-pecotmr) | pecotmr | 0.1.69 | dnachun | GPL‑3.0‑or‑later |
| r-susier | [Link](https://github.com/stephenslab/susieR) | [Link](https://anaconda.org/conda-forge/r-susier) | pecotmr, fastenloc | 0.14.7 | conda‑forge | MIT |
| backports.zoneinfo | [Link](https://pypi.org/project/backports.zoneinfo/) | [Link](https://anaconda.org/conda-forge/backports.zoneinfo) | pecotmr, quantqtl | 0.2.1 | conda‑forge | Apache‑2.0 |
| bioconductor-variantannotation | [Link](https://bioconductor.org/packages/release/bioc/html/VariantAnnotation.html) | [Link](https://anaconda.org/bioconda/bioconductor-variantannotation) | pecotmr, quantqtl | 1.48.1 | bioconda | Artistic‑2.0 |
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2 changes: 1 addition & 1 deletion container/containers.csv
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Expand Up @@ -73,7 +73,7 @@ trimmomatic,https://github.com/timflutre/trimmomatic,Java,0.39,N/A,bioconda,rna_
gtex-pipeline-qtl,https://github.com/broadinstitute/gtex-pipeline/tree/master/qtl,Python,gtex_v8,bed31e12a48b25db8b111252e2136b31c64c9e82,dnachun,rna_quantification,Other,https://anaconda.org/dnachun/gtex-pipeline-qtl,
pandas,https://pypi.org/project/pandas/,Python,1.3.5,N/A,conda-forge,"rna_quantification, tensorqtl, quantqtl",BSD-3-Clause,https://anaconda.org/conda-forge/pandas,
r-mvsusier,https://github.com/stephenslab/mvsusieR,R,0.1.7,N/A,dnachun,pecotmr,GPL-3.0-or-later,https://anaconda.org/dnachun/r-mvsusier,
r-pecotmr,https://github.com/cumc/pecotmr,R,0.1.67,N/A,dnachun,pecotmr,GPL-3.0-or-later,https://anaconda.org/dnachun/r-pecotmr,
r-pecotmr,https://github.com/cumc/pecotmr,R,0.1.69,N/A,dnachun,pecotmr,GPL-3.0-or-later,https://anaconda.org/dnachun/r-pecotmr,
r-fsusier,https://github.com/stephenslab/fsusier,R,0.2.0,dd4df3668d2ca59dd34a52b6c1b426054a998fbd,dnachun,pecotmr,GPL-3.0-or-later,https://anaconda.org/dnachun/r-fsusier,
backports.zoneinfo,https://pypi.org/project/backports.zoneinfo/,Python,0.2.1,N/A,conda-forge,"pecotmr, quantqtl",Apache-2.0,https://anaconda.org/conda-forge/backports.zoneinfo,
bioconductor-variantannotation,https://bioconductor.org/packages/release/bioc/html/VariantAnnotation.html,R,1.48.1,N/A,bioconda,"pecotmr, quantqtl",Artistic-2.0,https://anaconda.org/bioconda/bioconductor-variantannotation,
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2 changes: 1 addition & 1 deletion container/pecotmr/pecotmr.yml
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Expand Up @@ -15,7 +15,7 @@ dependencies:
- r-genio=1.1.2
- r-gwasrapidd=0.99.14
- r-mvsusier=0.1.7
- r-pecotmr=0.1.66
- r-pecotmr=0.1.69
- r-susier=0.14.7
- r-udr=0.3.154
- altair
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2 changes: 1 addition & 1 deletion container/readme/containers.md
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Expand Up @@ -47,7 +47,7 @@
| r-rmtstat | [Link](https://cran.r-project.org/web/packages/RMTstat/index.html) | [Link](https://anaconda.org/conda-forge/r-rmtstat) | pcatools | 0.3.1 | conda‑forge | BSD‑3‑Clause |
| r-fsusier | [Link](https://github.com/stephenslab/fsusier) | [Link](https://anaconda.org/dnachun/r-fsusier) | pecotmr | 0.2.0 | dnachun | GPL‑3.0‑or‑later |
| r-mvsusier | [Link](https://github.com/stephenslab/mvsusieR) | [Link](https://anaconda.org/dnachun/r-mvsusier) | pecotmr | 0.1.7 | dnachun | GPL‑3.0‑or‑later |
| r-pecotmr | [Link](https://github.com/cumc/pecotmr) | [Link](https://anaconda.org/dnachun/r-pecotmr) | pecotmr | 0.1.66 | dnachun | GPL‑3.0‑or‑later |
| r-pecotmr | [Link](https://github.com/cumc/pecotmr) | [Link](https://anaconda.org/dnachun/r-pecotmr) | pecotmr | 0.1.69 | dnachun | GPL‑3.0‑or‑later |
| r-susier | [Link](https://github.com/stephenslab/susieR) | [Link](https://anaconda.org/conda-forge/r-susier) | pecotmr, fastenloc | 0.14.7 | conda‑forge | MIT |
| backports.zoneinfo | [Link](https://pypi.org/project/backports.zoneinfo/) | [Link](https://anaconda.org/conda-forge/backports.zoneinfo) | pecotmr, quantqtl | 0.2.1 | conda‑forge | Apache‑2.0 |
| bioconductor-variantannotation | [Link](https://bioconductor.org/packages/release/bioc/html/VariantAnnotation.html) | [Link](https://anaconda.org/bioconda/bioconductor-variantannotation) | pecotmr, quantqtl | 1.48.1 | bioconda | Artistic‑2.0 |
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