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Update YAML files and Markdown table
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al4225 committed Sep 17, 2024
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1 change: 1 addition & 0 deletions container/README.md
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Expand Up @@ -95,6 +95,7 @@ On occasion, you may see errors that a download or upload has failed while build
| bioconductor-biocsingular | [Link](https://bioconductor.org/packages/release/bioc/html/BiocSingular.html) | [Link](https://anaconda.org/bioconda/bioconductor-biocsingular) | pcatools | 1.16.0 | bioconda | GPL‑3.0‑or‑later |
| bioconductor-pcatools | [Link](https://www.bioconductor.org/packages/release/bioc/html/PCAtools.html) | [Link](https://anaconda.org/bioconda/bioconductor-pcatools) | pcatools | 2.12.0 | bioconda | GPL‑3.0‑or‑later |
| r-rmtstat | [Link](https://cran.r-project.org/web/packages/RMTstat/index.html) | [Link](https://anaconda.org/conda-forge/r-rmtstat) | pcatools | 0.3.1 | conda‑forge | BSD‑3‑Clause |
| r-bigsnpr | [Link](https://privefl.github.io/bigsnpr/) | [Link](https://anaconda.org/conda-forge/r-bigsnpr) | pecotmr | 1.12.2 | conda‑forge | GPL‑3.0‑or‑later |
| r-fsusier | [Link](https://github.com/stephenslab/fsusier) | [Link](https://anaconda.org/dnachun/r-fsusier) | pecotmr | 0.2.0 | dnachun | GPL‑3.0‑or‑later |
| r-mvsusier | [Link](https://github.com/stephenslab/mvsusieR) | [Link](https://anaconda.org/dnachun/r-mvsusier) | pecotmr | 0.1.7 | dnachun | GPL‑3.0‑or‑later |
| r-pecotmr | [Link](https://github.com/cumc/pecotmr) | [Link](https://anaconda.org/dnachun/r-pecotmr) | pecotmr | 0.1.69 | dnachun | GPL‑3.0‑or‑later |
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1 change: 1 addition & 0 deletions container/pecotmr/pecotmr.yml
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Expand Up @@ -9,6 +9,7 @@ dependencies:
- bioconductor-variantannotation=1.48.1
- htslib
- python-ldstore=0.1.9
- r-bigsnpr=1.12.2
- r-complexupset=1.3.3
- r-cowplot=1.1.1
- r-fsusier=0.2.0
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1 change: 1 addition & 0 deletions container/readme/containers.md
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Expand Up @@ -45,6 +45,7 @@
| bioconductor-biocsingular | [Link](https://bioconductor.org/packages/release/bioc/html/BiocSingular.html) | [Link](https://anaconda.org/bioconda/bioconductor-biocsingular) | pcatools | 1.16.0 | bioconda | GPL‑3.0‑or‑later |
| bioconductor-pcatools | [Link](https://www.bioconductor.org/packages/release/bioc/html/PCAtools.html) | [Link](https://anaconda.org/bioconda/bioconductor-pcatools) | pcatools | 2.12.0 | bioconda | GPL‑3.0‑or‑later |
| r-rmtstat | [Link](https://cran.r-project.org/web/packages/RMTstat/index.html) | [Link](https://anaconda.org/conda-forge/r-rmtstat) | pcatools | 0.3.1 | conda‑forge | BSD‑3‑Clause |
| r-bigsnpr | [Link](https://privefl.github.io/bigsnpr/) | [Link](https://anaconda.org/conda-forge/r-bigsnpr) | pecotmr | 1.12.2 | conda‑forge | GPL‑3.0‑or‑later |
| r-fsusier | [Link](https://github.com/stephenslab/fsusier) | [Link](https://anaconda.org/dnachun/r-fsusier) | pecotmr | 0.2.0 | dnachun | GPL‑3.0‑or‑later |
| r-mvsusier | [Link](https://github.com/stephenslab/mvsusieR) | [Link](https://anaconda.org/dnachun/r-mvsusier) | pecotmr | 0.1.7 | dnachun | GPL‑3.0‑or‑later |
| r-pecotmr | [Link](https://github.com/cumc/pecotmr) | [Link](https://anaconda.org/dnachun/r-pecotmr) | pecotmr | 0.1.69 | dnachun | GPL‑3.0‑or‑later |
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